KEGG   Benincasa hispida (wax gourd): 120073490
Entry
120073490         CDS       T07258                                 
Name
(RefSeq) protein PAT1 homolog 2-like
  KO
K12617  DNA topoisomerase 2-associated protein PAT1
Organism
bhj  Benincasa hispida (wax gourd)
Pathway
bhj03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bhj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    120073490
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bhj03019]
    120073490
Messenger RNA biogenesis [BR:bhj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     120073490
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     120073490
SSDB
Motif
Pfam: TFIIA
Other DBs
NCBI-GeneID: 120073490
NCBI-ProteinID: XP_038882433
LinkDB
Position
1:76207697..76218040
AA seq 807 aa
MEQPDVKDLRDSAENSSANSLFDASRYEFFGQNVVGEVELGGLEEDEDVPLFGSTDEEYH
LFVREESAGLGSLSEMDDLASTFAKLNKVVTGPRHPGVIGDRGSGSFSRESSSATDWAQD
GDFCNWLEQHVFDSECAQEEKRWSSQPQSSVRLPDPKPLYRTSSYPQQQPTQHHFSSEPI
LVPKSSFTSFPPPGSRSQHGSPRHLNIPSLADGSQLPFSAPNITSLSKSNLQLAGMHHGL
HYGGNMHQFTTPGLSFSSRPQNQWVNNAGLLHGDHSNLFNSILQQQLSHQNGLLSPQLLS
AHQQLQQHRLHHPVQPSLAHFAALQSQLYNAHSQSSHRAMLGLTDVRDQKPKSQRGKHNM
RSSQQGSETGSQKSDSGSIQFRSKHMTADEIESILKMQHAATHSNDPYIDDYYHQARVAK
KAAGSRLKNAFCPSRLRELPSRSRSGSDQHSHSTPDSLGKIPLASIRRPRPLLEVDPPLS
GSCDGSSEQTISERPLEQEPMLAARITIEDGLCLLLDIDDIDRLLQHNKPQDGGVQLRRR
RQMLLEGLAASLQLVDPLGKSSHGVGPSPKDDIVFLRLVSLPKGRKLLSKFLKLLFPGSE
LARIVCMAIFRHLRFLFGGLPSDPGAAETTSNLSKTVSTCVNGMDLRALSACLVAVVCSS
EQPPLRPLGSSAGDGASIVLKSILERATELLTDPHAASNCSMPNRALWQASFDEFFSLLT
KYCVSKYETIVQSLFSQTPSSTDVIGSEAARAISREMPVELLRASLPHTNAPQRKLLMDF
AQRSMPVSGFSAHGGSSGQMNSESVRG
NT seq 2424 nt   +upstreamnt  +downstreamnt
atggaacaacctgatgtcaaggatttgagagactctgcggagaattcctctgccaattcg
ctctttgatgcttcacgatatgagttttttggtcaaaatgtcgtgggagaagtggagctg
ggtggtttagaagaagatgaagatgtccctttatttggatctacagatgaagagtatcat
ttgtttgttcgggaagagagtgcagggttgggatctttatcggaaatggatgatttggca
agtacttttgctaagttgaacaaagttgttactggaccaagacatccaggagtcattgga
gatcgaggatctggttctttttctcgagaaagttcatctgcaactgattgggcacaagat
ggagacttttgtaattggttagagcagcatgtatttgattcagaatgtgctcaggaggaa
aagagatggtcatctcaacctcaatcttccgttcgtcttccagatccgaaacctttgtat
agaacatcctcttacccacagcagcaacctacacaacatcacttttctagtgaaccaatt
ctagtaccgaaatcttctttcacatccttccctcctccaggaagtagatctcaacatggt
tcacctcgtcacttaaatatcccatctcttgcagatggaagtcagttacccttctctgca
ccaaacatcacttctttatctaagtctaatctgcagttagctggtatgcatcatggcttg
cattatggaggcaacatgcaccagttcaccactcctggcctttcttttagtagcaggcca
caaaatcaatgggttaacaatgcaggtctattgcatggggaccactcaaatctctttaac
agtatattgcaacagcaactatctcatcaaaatggccttctgtcccctcagttactgtca
gctcatcagcagctgcaacaacacaggctgcatcatccagttcaaccatctttggcgcat
tttgcagctcttcagtctcagctctataatgcccattcacaatcctcacacagagcaatg
ctcggattaaccgatgtgagggaccagaaacctaagtcgcagcgagggaaacataacatg
cgttcttctcagcaaggttctgaaaccggtagtcaaaagagtgatagtggatccatccag
ttcagatctaagcatatgacggctgatgagattgagagtatcctgaagatgcagcatgct
gccacccacagcaatgatccttacatagatgactactatcaccaggctcgtgttgccaaa
aaagctgctggttcaagattgaaaaatgcattttgtccatctcgattaagagagcttcca
tcccgatctcgtagtggttcagatcagcactctcattccacacccgattcattgggaaaa
atcccccttgcttctattcgtagacctcggcccctgcttgaagttgatcctccgttgtca
ggttcatgtgatggtagttctgaacagacgatatctgagaggcctctggagcaggaaccg
atgcttgctgctagaatcaccattgaagatggcctctgtcttcttctcgatatagatgat
attgatcggcttttacaacataataagccacaagatggaggagtccagcttagacgaagg
cggcagatgctgctggaaggtttggcagcatcacttcagcttgttgacccacttggaaaa
agtagccatggtgttggcccctctccaaaagatgacattgtgttcttgcgtttggtctct
cttcccaaaggtcgaaagcttctttctaaattcctgaagttgcttttccctggtagcgag
cttgcacgaattgtctgtatggctatttttcgtcacttaaggttcttgtttggtggactt
ccatctgatcctggagcagctgagacaacatctaatctttccaagactgtttctacctgt
gttaatggtatggaccttcgtgcactaagtgcttgtcttgttgcagttgtctgttcctct
gagcagccaccacttcgcccccttggaagttctgctggagatggggcctctatcgtactg
aagtccattcttgaaagggctactgaactattaaccgatcctcatgctgctagtaactgt
agcatgcctaaccgtgcactctggcaggcatcctttgatgaattcttcagtctccttacc
aagtactgtgtgagtaaatatgagactatagtgcagtcattattttcacagacgccatcg
agtactgatgtgatagggtcagaggcagccagagccatcagccgtgaaatgcctgtggag
cttctccgtgctagtcttccccacacaaatgcaccccaaaggaagcttttaatggatttt
gcccagcgttcaatgccagtttctggattcagtgcccatggtggaagtagtgggcaaatg
aattcagaatcagttaggggttag

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