Benincasa hispida (wax gourd): 120073611
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Entry
120073611 CDS
T07258
Name
(RefSeq) replication factor C subunit 3-like
KO
K10756
replication factor C subunit 3/5
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03030
DNA replication
bhj03410
Base excision repair
bhj03420
Nucleotide excision repair
bhj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120073611
03410 Base excision repair
120073611
03420 Nucleotide excision repair
120073611
03430 Mismatch repair
120073611
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bhj03032
]
120073611
03036 Chromosome and associated proteins [BR:
bhj03036
]
120073611
03400 DNA repair and recombination proteins [BR:
bhj03400
]
120073611
DNA replication proteins [BR:
bhj03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
120073611
DNA Replication Termination Factors
ELG1-RFC complex
120073611
Chromosome and associated proteins [BR:
bhj03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
120073611
DNA repair and recombination proteins [BR:
bhj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
120073611
Check point factors
HRAD17(Rad24)-RFC complex
120073611
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
DNA_pol3_delta2
RCF1-5-like_lid
AAA
AAA_23
ABC_tran
AAA_29
DUF815
Sigma54_activ_2
AAA_5
RVP_2
RsgA_GTPase
FtsK_SpoIIIE
nSTAND1
nSTAND3
Motif
Other DBs
NCBI-GeneID:
120073611
NCBI-ProteinID:
XP_038882349
LinkDB
All DBs
Position
3:51519906..51532970
Genome browser
AA seq
503 aa
AA seq
DB search
MFCKHLQVFLRETICGGFAWGFHEGVKKQNQFIGEHIRNLTETRHRRGTTDDDIIAVSRS
FPHLSRGVVEDVLVKVGDFIFPVDFVVLDMEEDFEIPIILGRPFLAIGRALIDVYDGKVT
LWVNDEEMKFNIFVLSSLRMCEHFLFPAISSLCSLFQSHFFLFVHTLKFPSQNLKKLVTE
QDCPHLLFYGPSGSGKKTLVMALIWQMFGASAEEVKVENKTWKVDAETRTIDIELTTLSS
TNHVELTPSDAGFQDRYIIQEIIKEIAKNRQIDSKGKKGHKVLVLNDIDKLSREAQHSHR
RTMEKYSSYCRLILCCNSSSKVTEAIRSRCLNVRINGPTEEQILKVLEFIGKKERLQLPS
RFASRIVDKSNRSLRRAILSFETCRVQQYPFVSNQAIPPMDWEEYIIEIASDILKEQSPK
RLFQVRGNLYELLVNCIPPEIILKRLLYELLEKLDAELKHEICHWAAYYEHRMHLGQKAI
FHIEAFVAKFMSIYKTFLISTFG
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgttttgcaagcacctccaagtttttctaagagaaaccatatgtggaggctttgcttgg
ggatttcatgaaggagttaagaagcagaaccaatttattggagagcacataaggaatctg
acggaaactagacataggagaggtacaaccgacgacgatatcattgcagttagcagatcg
ttccctcacttatcccgtggtgtagtagaggatgttcttgttaaagtcggtgatttcatc
ttcccagtagattttgtggtcttagatatggaagaagactttgaaattcccatcatcctt
ggaaggccattcctagccataggcagagcattgattgatgtatatgatggcaaggttaca
ctttgggtgaatgatgaggagatgaagttcaacatttttgttctttcaagcctgaggatg
tgtgaacactttctttttcccgccatttcaagcctttgctctctctttcaatcacacttc
tttctctttgtccataccctcaaatttccatcacagaatcttaagaaattggttaccgaa
caggactgtcctcatttgctcttctatggcccctccggttccggaaagaaaaccctagtc
atggccctcatctggcagatgttcggagccagtgcggaggaagtgaaggtggagaacaaa
acgtggaaagttgatgctgaaactagaactatcgatatagagttgaccaccttatcaagt
acaaaccacgtggagctcactcccagcgatgcaggtttccaagatagatatattattcaa
gagattatcaaagaaatagcaaaaaacagacaaattgactccaaagggaaaaaggggcat
aaagttttggttctaaatgacattgacaaactatcaagggaagcccaacactctcatagg
agaacaatggagaaatatagctcatattgtaggttaattctttgctgcaatagttcatca
aaagttactgaagcaatccgttctcgctgcctaaatgtgcggataaatggaccaacagag
gagcagattctcaaggtactggagttcattgggaagaaagaaagactgcaacttccatct
agatttgcttcccgtattgtagacaaatcaaaccggagtttgaggagagctatactatca
tttgagacttgtcgtgttcaacagtatccttttgtcagtaaccaggcaataccaccaatg
gattgggaggagtacatcattgagatagcatctgacatattgaaggagcagagtcccaag
agattgttccaggttcgcgggaatttatacgagctactggttaattgtatcccaccggag
attatattgaagaggctgctttatgagctactcgagaaattggatgctgaactaaagcat
gagatctgtcattgggccgcatattatgaacacaggatgcaccttggacagaaagccatc
ttccacattgaagcttttgtggcaaagttcatgagcatatacaagactttcctcatttca
acattcggctaa
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