Benincasa hispida (wax gourd): 120073721
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Entry
120073721 CDS
T07258
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
bhj
Benincasa hispida (wax gourd)
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
120073721
Enzymes [BR:
bhj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
120073721
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
RhgB_N
AHH
Motif
Other DBs
NCBI-GeneID:
120073721
NCBI-ProteinID:
XP_038882453
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Position
3:complement(36050208..36054616)
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AA seq
694 aa
AA seq
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MEKKGKRRRQQKKLELSAMAALIFLFFSFTLAKAKPQQQQSFQQRMRRNLVENNNKPTLS
RDVTLEWQNHGQVVIDNGLVRVTLSRPDGNVIGLKYKGIDNVLEIHNAQHNRGYWDVVWN
RPNRASATDRVRATEFKVITVNSDQIELSFTKTWDPSDSSSLPLNIDKRYILRRGDYGFY
SYGIFERLDGWPQIDVDQIRIVYKLQGDKFHYMAISDNRQRIMPTLQDRLMGRPLAYPEA
VLLTRPINSNLKGEVDDKYQYSLENMENKVHGWESSEPHVGFWMITSSDEFRTAGPVKQD
LTSHVGPTTLSMFVSTHYAGKEVSMRFGEGEAWKKVFGPVFTYLNSDPTGTGSLGSLWED
AKNQMRIERSKWPYNFVESGDFPSSDQRGTVSGRLLVRDRYAKNSHMWADSAYVGLAAPG
ESGSWQKESKGYQFWTRADEQGYFSIDNIRPGNYNLYAWVPGVVADYKYDKEIIVTPRSS
TNLNLLVFHPPRQGPTLWEIGVPDRTAAEFYIPNPQPTLMNRFYNNSKFHTQDNFRQYGL
WEQYSELYPNQDLVYNVTTDNYRRHWFFAHVTRATTSDNYEATTWQIVFRLQGPKQTGNY
MLRLALASSTDAVVDIRFNNPSATRPHFSTGYWSSGKDNAIARHGIHGLYWLFNFQVPSQ
YLVEDENVIYLTQRRHTGPFQGVMYDYIRFEGVE
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaaaggcaaaagaagaaggcaacagaaaaagcttgagctctcagcaatggcc
gcacttattttcttattcttcagttttactctcgccaaggccaaaccacaacaacaacaa
tccttccaacaaagaatgagaagaaatctggtggagaacaacaacaaaccaacgttgtca
cgcgacgtaacattggaatggcagaatcatggacaggtggtaattgacaatggcttagtt
cgagtcacattatctcgtccagatggcaatgttattggcctaaaatataagggtattgat
aacgtacttgaaattcacaatgcacaacataatagaggatattgggacgtggtttggaac
cggccgaatagagctagtgccactgacagagtaagggcgacagaattcaaagtgatcacg
gtgaatagtgaccaaatagaactttcattcaccaaaacttgggatccttctgattcttct
tcactccctttgaacatagacaaaagatacattctacgacgcggcgattatggattctat
tcatatggcatatttgaaagattagatggatggcctcaaattgacgttgatcagattagg
attgtctacaaactccaaggggacaagtttcattacatggcaatatcagacaacagacaa
aggatcatgccaacgttacaggaccgtttgatgggacgacctctagcttatccagaggcg
gttctcttaacacgaccgatcaattctaacctcaaaggagaggtggacgataagtaccaa
tactctttagaaaatatggagaacaaagttcatggatgggagtcgagtgagccacacgtg
ggattctggatgatcacgtccagtgatgagtttcgcacggcggggcccgtcaagcaagat
ctcacttcccacgtcggccccaccactctctctatgtttgtaagtacacattatgcgggt
aaagaagtttccatgagatttggagagggagaggcttggaagaaggttttcggaccggtt
ttcacttatctgaactcggatccgaccggcacaggaagtctcggttcactatgggaagat
gctaaaaaccagatgaggatagaaaggagtaagtggccatacaactttgttgaatccgga
gactttccatcgtcggaccaaagaggcaccgtgagtggtcgattattagtccgagataga
tacgctaagaactcacacatgtgggccgattcggcttatgtgggcctcgccgctcccggg
gaatcggggtcttggcaaaaagaaagcaagggataccagttctggacacgcgcggacgag
caaggatacttctcaatcgacaatataaggcctggaaattacaatttatatgcttgggta
cctggcgtcgttgccgattacaagtatgacaaggaaatcatagttacaccaagaagttcc
accaacctaaacttgttggtcttccaccctccaagacaaggcccaactttgtgggagatt
ggcgtcccagatcgaacggcggctgagttctatataccgaatccccaacccaccctcatg
aatcgcttttacaataattctaaattccacacccaagataattttcgacaatatggtctt
tgggaacaatactctgaattgtatcccaatcaagatctcgtctacaatgtcaccactgac
aattaccgtcgccactggttcttcgctcacgtcacccgagcaactacatccgataactat
gaggcaaccacatggcaaattgtgtttcgtcttcaagggcctaaacagactggtaactat
atgctccgattggccttggcctcctctaccgacgcagtcgtcgatatacggttcaacaac
ccatctgccacacggcctcatttctcgaccgggtattggtcctcgggaaaagataacgcc
attgccagacatgggattcatggcctttattggttattcaacttccaggttcccagccaa
tatttggtagaagatgaaaacgtaatctatcttacacagagaagacatacaggacctttt
caaggagtaatgtacgactacatacgatttgaaggtgtagagtaa
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