Benincasa hispida (wax gourd): 120073779
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Entry
120073779 CDS
T07258
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 2
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
bhj
Benincasa hispida (wax gourd)
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bhj01009
]
120073779
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhj03021
]
120073779
Enzymes [BR:
bhj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
120073779
Protein phosphatases and associated proteins [BR:
bhj01009
]
HAD phosphatases
Fcp/Scp phosphatases
120073779
Transcription machinery [BR:
bhj03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
120073779
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPOC_CPL1_2
NIF
dsrm
Viral_DNA_bp
Motif
Other DBs
NCBI-GeneID:
120073779
NCBI-ProteinID:
XP_038882545
LinkDB
All DBs
Position
3:46105816..46114569
Genome browser
AA seq
824 aa
AA seq
DB search
MSRLGFKSAVFHGDVRLGELDAIPATDQNFQFPNNEIRIHRISPPSERCPPLSVLQTISS
FSLRCKLQSSLPVEQPHLIQLHYSCFHELKTAIVLVGDEEIHLVAMPSKQKNFPCFWCFA
VPCGLYLSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRVWIARETDPLRISGM
SAELKRYMEDRSLLKQYIENDTVNDNGRIFKVQLEEVPPLNGNCQKVVRPIIRLLDKNIV
LTRINPEIRDTSVLVRLRPAWEDLRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPEA
HLIATKQLLERVVCVKSGSRKSLLNVFQSGSCHPKMAMVIDDRSKVWEDKDQPRVHVVPA
FTPYYAPQAETANAVPVLCVARNVACNVRGCYFKEFDESLLRRILEISYEDDVVDLPPAP
DVSSYMMSEEAGFVSNETVNAPICEGMNGVEVERRLNQPDDKHVIDMANNSTTSQTDAKA
DTSQVPPPLNPNVIGPKYSRTLLPSQKPGLLGAPVRRDLSSDHDMKRGLLAMKPGIDLRT
QNFGEPPILSRMPVQVSASGLQVLGSSLVDDDSSKGHQNSRSSGLVQESDASKSDKHRSH
QNLFSNISQGLAISQNRASINNKEHQTIQTEAEMVSIPPPSLYIGVLQEIGRRCSSKVEF
KTVVSTSKDLQFSVEVLFTGEKIGVGLGKTRKDAQQQAAENALHNLADKYAAHIKPLMGP
MDADLDKVSIGVENGFLWDTTAPADNELLKEEDVLHKENNSEAFDEPPESTNSDSANQQQ
QHVQKRQSSPRSFPSKRSKEDDVHGPKNHHLAASRQQKNGHSIT
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtttagggttcaaatcggcggtgtttcacggcgacgtccgtcttggggaactt
gatgctattccggccacggaccagaattttcagtttccgaacaacgagattagaatccac
cgtatatcgccgcctagtgagagatgtcctcctctttcagttcttcagacaatttcttca
ttttctcttaggtgtaagctacaatcttccttgcctgttgaacagccgcacttgatccag
cttcactactcctgtttccacgaattgaagacagcaattgtgttggttggagacgaagaa
attcacctggttgcaatgccgagcaagcagaagaactttccgtgcttttggtgttttgca
gtgccgtgtggcttatatctatcatgtttaggaatgctaaatcttaggtgtcttgcaatt
gtttttgatctagacgagacacttattgtggcaaacactatgaaatcttttgaagataga
atcgaagctcttcgagtttggattgcgcgagagacagatccattgcggatatctggaatg
tctgctgaactgaagcggtacatggaagatcggtcactattgaaacagtatattgagaac
gatacagttaatgataatggaaggattttcaaggtgcagctggaagaggttcctccacta
aacggcaactgccagaaagtagtgcgtcctattattagattgctggacaagaatattgtt
cttactcgaatcaatccagagattcgtgatactagtgttcttgtgaggttacgtcctgca
tgggaagacttaagaagctatttgactgccaagggacgcaagcgatttgaagtttatgta
tgtaccatggctgaaagagattatgcattagaaatgtggaggcttcttgatccagaagcg
cacctgattgcaactaagcagcttcttgaacgtgttgtttgtgtcaaatcaggctctagg
aagtctttgctgaatgtcttccaatccggttcatgtcatccaaagatggccatggttatt
gatgaccgttcaaaggtttgggaagacaaagaccaaccacgtgttcatgtagttccagca
tttactccttactatgctcctcaagcagagacagcaaatgcggtccctgtcctctgtgtg
gctaggaatgttgcatgcaatgtcaggggttgttacttcaaagaatttgacgaaagtttg
ttgcgacggattctggaaatttcttatgaagatgatgtggttgatctacctcctgctcct
gatgtgagcagctatatgatgtcagaggaagctggttttgtatccaacgagactgtgaat
gctccaatttgtgaaggaatgaatggtgttgaagtggaaaggagattgaatcaaccagat
gataagcatgtaatagacatggccaataattctaccacgagccaaacggatgcaaaagca
gatacttctcaagtgccaccacctctcaatccgaatgttattggaccaaaatattcaaga
actttactgccttctcaaaagcctggtttgcttggggcccctgtcagacgagatctctct
tctgatcatgacatgaagagaggactcctagctatgaaacctggtatagatcttaggaca
cagaactttggcgaaccccctattctctccagaatgcctgtacaagtatcagcatccgga
ttacaggtgctaggaagttcattagtggatgatgactccagtaaaggacatcaaaatagt
cgatcttcaggacttgttcaagaatctgatgcttcaaaatctgataaacatcggtctcat
cagaacctatttagcaatatttcacaaggacttgctatatctcaaaatcgagcatctatc
aataataaagaacatcaaacaattcaaaccgaagcagagatggtttctatacctccgccc
tcgttatacattggagttctacaagaaattggtcgtagatgcagctcaaaggttgagttt
aaaactgttgtaagtaccagcaaggatttgcagttttcagttgaggttttgtttaccggc
gagaagattggtgttggtttgggtaagacgaggaaagacgctcaacaacaagctgctgag
aatgcgcttcacaatttggcagataagtatgctgcacatatcaagcctcttatgggaccc
atggatgcagatctcgacaaggtttctattggagttgaaaatggatttttatgggacact
actgctcctgcagataacgagttgctgaaggaagaagacgttttgcataaagagaacaac
tctgaggcttttgatgaacctcctgagagtactaattctgattcggcaaatcagcagcag
cagcatgttcagaagcggcagagttccccgagatcatttccaagtaaacgatcaaaggaa
gatgatgttcatggtccaaaaaatcatcatcttgcagcttcacggcaacagaagaatggc
cattccattacttga
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