Benincasa hispida (wax gourd): 120074112
Help
Entry
120074112 CDS
T07258
Name
(RefSeq) transcription initiation factor TFIID subunit 12
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120074112
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhj03021
]
120074112
03036 Chromosome and associated proteins [BR:
bhj03036
]
120074112
Transcription machinery [BR:
bhj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
120074112
Coactivators
SAGA/TFTC/STAGA complex
120074112
Chromosome and associated proteins [BR:
bhj03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
120074112
STAGA complex
120074112
TFTC complex
120074112
SAGA complex
120074112
SLIK complex
120074112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
Histone
Motif
Other DBs
NCBI-GeneID:
120074112
NCBI-ProteinID:
XP_038883059
LinkDB
All DBs
Position
3:38687814..38694396
Genome browser
AA seq
511 aa
AA seq
DB search
MDSSSQSPSEPPAASSPHIPPASTVPSATTSVVVPPQSSPNANPNINPSSFQNQNPNSKA
STPLPNQPSQQQQSLPPSQQISRPSASLSGTWQPPSHFSHFSSPSPSASSSVPTPRPVSA
SSPAQRGGVAIGVPAHQPSPSPQPAPFSASYGQHFGGLGRGGVSISDGPSNVNPSQVRPP
MQGMQGLGMLGSSGSSPQMLQRPVQSSLRPPSTPNSASQSFQGHGLLRVPSTSSPSSSLP
NTSQGMQPSNQPWLPSSSQGKPPLPTPSYRPQVNSPAMQQRSHIPQQQNHPLTPAPQQQQ
ISSAPQQQPAHSHQPQEHFAQQFQSSRSPQGLPHQQQAARAQGPANQKPSPLAPSQTNNT
QTMTQSRAITAETEEPCSRILSKRSIGKLVNQIDPSERLDPEVEDILVDLAEEFVESITT
FGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLTNDTHRERLAAVKK
SIVASEMANTRNSAGQAAGNTKSSLTKTPAV
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggattcttcatcacagtcgccgtccgaacctccggctgcttcttctcctcatatacct
ccggcttcaacagtcccctccgccacaacttccgtcgtagttccaccgcaatcgtcccca
aatgcgaaccctaatatcaacccgagttcatttcaaaatcagaaccccaattccaaggcc
tcaactcctctacccaaccagccttcacaacaacaacaatctcttcccccttcacagcaa
atctctaggccttccgcctcattgtctggaacttggcaaccgccctcgcatttctctcat
ttttcttctccttcgccttctgcttcatctagcgttcctacacctcgccctgtttctgct
tcttctccagcccaaaggggcggtgtcgccattggggttccagctcaccagccgagtccc
tctcctcagcctgccccgttttctgcatcttatggccagcattttggtgggttgggccga
ggtggcgtcagcatatcggacgggccttctaatgttaacccttcccaggtgagacctcct
atgcaaggaatgcagggattgggaatgttgggatcaagtggttctagtcctcaaatgttg
cagagacctgtgcaatcttctctcaggccaccatctaccccaaactcagcttcccaaagt
ttccaaggccatggtctcttgagggtaccatcaactagttctccaagttcttcattgcca
aatacgtcacaaggtatgcaaccctccaaccagccatggttgccatctagctcacaagga
aaaccaccacttccaacaccttcatatagaccgcaggtaaactcacctgctatgcagcaa
aggtcacatatccctcaacaacagaaccatcccttaactccagctcctcagcagcagcaa
atttcatcagctcctcagcaacaacctgctcattcacatcagccgcaggagcattttgca
caacaatttcaatcgtcaaggagtccacaagggttaccacatcaacagcaggccgcaaga
gctcagggaccagcaaaccagaagccttctcctcttgcaccttcacaaactaataataca
cagacaatgacccagagcagagctataactgcagagacggaagaaccctgtagtagaatt
ctcagcaaaagaagtattggcaaattggttaaccaaattgatccatctgagagattggat
cctgaagtggaagatatactcgttgatctagcagaagagtttgttgagtcaattacaacg
tttggttgctcattagcaaagcatcgcaaatcaactacattggaagcaaaagacatcctt
ctacatcttgaaaaaaactggaatctaacccttccgggatttggtagtgacgagattaag
atattcagaaaaccgcttacaaatgatactcacagagaacgtcttgcagcagtaaaaaaa
tctatcgtagcaagtgagatggctaatacgaggaattctgctggacaggctgcaggaaat
acaaaaagcagtctaacaaaaacacctgcagtctag
DBGET
integrated database retrieval system
