Benincasa hispida (wax gourd): 120074706
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Entry
120074706 CDS
T07258
Name
(RefSeq) uncharacterized protein LOC120074706 isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03030
DNA replication
bhj03410
Base excision repair
bhj03420
Nucleotide excision repair
bhj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120074706
03410 Base excision repair
120074706
03420 Nucleotide excision repair
120074706
03430 Mismatch repair
120074706
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bhj03032
]
120074706
03036 Chromosome and associated proteins [BR:
bhj03036
]
120074706
03400 DNA repair and recombination proteins [BR:
bhj03400
]
120074706
DNA replication proteins [BR:
bhj03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
120074706
DNA Replication Termination Factors
ELG1-RFC complex
120074706
Chromosome and associated proteins [BR:
bhj03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
120074706
DNA repair and recombination proteins [BR:
bhj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
120074706
Check point factors
HRAD17(Rad24)-RFC complex
120074706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
AAA_lid_RFC1
TraK_N
DNA_pol3_delta2
AAA_16
AAA_2
Motif
Other DBs
NCBI-GeneID:
120074706
NCBI-ProteinID:
XP_038883850
LinkDB
All DBs
Position
3:27116509..27120550
Genome browser
AA seq
734 aa
AA seq
DB search
MCPALNLMKQRKDGYEPSDTETEWQESPWNDPKEKKLVLDYNNRRTDSAVSKKFTAAANV
SPPGLRRNGGKTPRRPAKDDSVLVMLQRNISPLSRAERRRHESPFKAAGEEIGSSSMRSR
KEENLTSSHGSSRISQKPGYSRRSVTAPRLRMRDEHMIAVNDLSQRRERVAPTLQVSSIL
QQPKEVSQVNSLSIGEMNELIADGRINRGLAFNDPVAESMGSISPGDIFFSRDGLPIGMN
NNVTSKRNAFKNYISPKPAFVAKKNDDTYNQVAVNANGRGVSSAGAGLSSTTTSSAAVSR
ENSSRISIENSKISDVSGRTSESTKRFIANRRKKKNDIWFSCMRNGTCRTTKSPEKRPFD
EATYIEKANVVEYLKPFWADQHRPVSLNGFTFHKHEAQLLKQLVSQDSFPHILFKGPRGS
GKRVLMMALLREIYGDSCWNVSHDLRRFQIQERKLTQVFVPLTSSAHHVELNLSSESNAK
YALLGLAKEIGSEYSINVEARNVNPKANFKVVVLLDVDKAAEDIQHLLRWIMDGYKDACK
VVLCCEDDTGILESVIRRCKVIKINPPVTHEIMDVLIKIAEKEEFDLPMNFASKIATKAK
QNLRKAIMALEACKAHNYPFSDDQPIPIGWEEAVVELAAHILEDPSNPRLHQVKEKIQKL
LVDSVHPKLILQKLVEQFLKRIELRSRRELYYWHAYYNKRLPIETGTSALPKLEEFVAKF
MSMYRKSSTNFVYD
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgtgtccagctttgaacttaatgaagcagaggaaggatggttatgaaccatctgatact
gagacagaatggcaagaaagcccttggaatgatcctaaggagaagaaacttgtactggat
tacaataatcgaagaactgattcggcagtatccaagaagttcactgctgcggcgaatgtt
tctcctcctggtttgagaagaaacggtggcaaaacacctcgcaggccagccaaagacgat
agtgttcttgttatgcttcagagaaacatcagccccttgtcaagagcagaaagaagaaga
catgagtctccttttaaagctgcgggggaggaaattggaagctctagcatgaggtcaaga
aaagaggagaatttgacttcttctcatgggagtagcagaataagtcaaaaaccaggctac
agtaggagatcagtgactgctccaaggttgaggatgagagatgaacatatgattgctgta
aatgatttatctcagaggagagagagagtagctccaaccttgcaggtcagctccatccta
caacagccaaaggaggtttcccaggtgaattctctatctattggtgaaatgaatgaactg
atcgcagatggaaggattaatagaggtttggcttttaatgaccctgtggctgaaagcatg
gggtcgatctcaccgggggatatattcttttcgcgtgatggcttgcctattgggatgaat
aacaatgtcacctcaaagagaaatgcgttcaaaaactatataagtccaaagcctgcattt
gtggctaaaaagaatgatgatacttataatcaagtggcagtaaatgctaatggtagagga
gtttcttctgctggagcaggtttgtcatcgaccacaaccagtagtgccgctgtaagtaga
gaaaatagtagtagaattagcattgaaaatagtaagatcagtgatgtgagtggaagaaca
agtgagagtactaaaaggtttatagccaatagacgaaagaagaagaatgatatatggttt
tcttgtatgaggaatgggacttgcaggacaacaaaatcgcctgaaaagcgaccatttgat
gaagctacatatattgaaaaggcaaatgttgttgaatacttgaaacccttctgggcagat
cagcatagaccggtttccttaaatggtttcactttccataagcatgaggcccaacttctc
aaacaattagtttcacaggacagttttccccacattctcttcaaaggtccacgtggatct
ggcaaaagagtgctgatgatggctcttctgcgtgagatatatggtgattcatgttggaat
gtttctcatgatttgcgacgtttccagattcaggaaagaaaactgacgcaagtcttcgtt
ccattgacatcaagtgctcaccatgtggaactaaatttaagctccgaatcaaatgctaag
tatgctttactgggattggctaaagaaataggcagtgaatattctattaatgtggaagca
agaaatgttaatcccaaggcaaatttcaaagtggtagtccttttagatgtagacaaagct
gcagaggatattcaacacttgcttaggtggattatggatggctataaggatgcttgtaaa
gttgtactttgttgtgaagatgacacaggcatccttgaatcagtgatacgccgctgcaaa
gttattaaaattaaccctcctgtaactcatgaaatcatggatgtacttatcaaaatagca
gagaaagaggaatttgacttacccatgaacttcgcttctaagattgctactaaagcaaag
caaaacctgagaaaagcaatcatggcgcttgaagcatgcaaggcacacaattatccattt
tctgatgaccagccaatccccattggatgggaagaggccgtggtagaactcgcagcccat
atcctcgaagacccctcaaatccaagattacaccaagtaaaagaaaaaattcagaagctt
ctagttgattcggttcatcctaaactaattctccagaagcttgtggaacaatttctgaaa
agaattgagctgagatcaaggagggaactttattattggcatgcttattataacaagaga
ctcccaattgaaactggaacaagtgcgttacccaaattagaagaatttgtggcaaagttc
atgagcatgtacaggaagagctccaccaacttcgtatatgattga
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