Benincasa hispida (wax gourd): 120074784
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Entry
120074784 CDS
T07258
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
120074784
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bhj04131
]
120074784
Membrane trafficking [BR:
bhj04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
120074784
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps8
Beta-prop_VPS8
TPR_Vps41
VPS8_N
Clathrin
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_WDR3_1st
TPR_VPS8_2
WD40
WD40_Gbeta
WD40_CDC20-Fz
WDR55
Beta-prop_WDR5
Beta-prop_RIG_2nd
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_HPS5
zf_RING_Vps8
WD40_Prp19
zf-RING_Vps41
Beta-prop_THOC3
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
120074784
NCBI-ProteinID:
XP_038883953
LinkDB
All DBs
Position
1:10886917..10931281
Genome browser
AA seq
1996 aa
AA seq
DB search
MCQYLQKRKRFTILVPPQSSQRNELASRSRMTKELTDNETLPLMELDLNAFIHAHLSSGD
GDDGDDDDDLSFPHRSIDEILNESSSSTSSPPHSPPSRGLRNNAAGDGGVSTSPSISPFK
SPFEETIKDPETPRSNQWNEKSVQLKPGAVSHAKVGELTDDPFRRGSRPLPSLFGGVRSN
AKPGAALAAAAAASRSTPAPHAAAIKSRRAGYGNMVLDDDELVSSSAVESEFFSDSLYHT
NIHSEDSGEKSISMVDRIADYQVASMNVGGELWERDNIGDGVPYNDEFLITRDMECEAEP
SSVDDVDFNESATTLPRVGANNRSLSGPVQKNVCSMETHPTALDVDESNEGAIPWSIEPD
DEGSSVGYGSLELETQDFEKCLQPSKDTEVDLAIEDPSEVDDIIELGETTEQLDNFQIGE
RPERMPLSSTNPLELAEEIEKKQAFTALHWEEGVAAQPMRLEGIKGGTTTLGYFDIQADN
SISRTISSHSFKREHGFSQVLAVHANYIAVGMSKGNIVVVASKSSAQNGDNMDAKMLLLG
SQGDKSTAPVTSLCFNQQGDLLLAGYSDGHITVWDVLRASAAKVISGEHTSPVVHSLFLG
QEAQVTRQFKAVTGDSKGLVLLHTFSVVPLLNRFSNKTQCLLDGQKTGTVLSASALLLNE
FCGSSLPPTLSNAAVSTSSIGSMMGGVVGGDSGWKLFNEGSSFVEEGVVVFATHQTALVV
RLSPTVEVYAQLSKPDGIREGSMPYTAWKCSQSFETSPSEAVERVSLLAIAWDKMVQVAK
LVKTELKVCGKWSLESAAIGVVWLNDQVLVILTVTGQLFLFEKDGTMIHQTSIFVDGFDK
EDFIAYHTHFVNVLGNPEKAYHNCVAVRGASIYVLGPMHLVISRLLPWKERVQVLRKAGD
WMSALSMAITIYDGHAHGVIDLPRSLESLQELVMPFLIELLLSYVDEVFSYISVAFCNQI
EKNEKLDDVMSESHYAHSEIKEQYNRVGGVAVEFCVHITRTDILFDEIFSKFVGVQQRDT
FLELLEPYILKDMLGSLPPEIMQALVEHYSHKGWLQRVEQCVLHMDISSLDFNQVVRLCR
DHGLYSALVYLFNKGLDDFRTPLEELLAVLRTSKSKRASSLGYKTLVYLKYCFSGLAFPP
GQGTLAHSRVQSLRDELLQFLLENSDPVDTRSISNKSSEVGYLNLYHLLELDTGATLDVL
RCAFVEDEVLKTNSSPDGSVDARMQLREEKNSISGRKNFLIQNVVDGLIHVLDKAICETD
GSQAGDNITLVNNWPSKKDLIHLFDFVATYVACGKATASKDVVGQILEHLISKSDIAETT
SDCLPHVTANSVHSRKREKQVLSLLEVVPETHWNPSSVLRMCEKAQFFQVCGLIHSIRRQ
YSSALDGYMKDLDEPIHAFVFINRALLELSNSERTEFRAVVISQIPELFNLNREATFFLV
IDHFNNEVSDILSQLHNHPRSLFLYLKTLIEVHLSGSLDFSCLKKDGNFGVNYSTKGLDD
YLQKLSDFPKYLSNNPVDVTDDIIELYVKLLCQYERESVLKFLETFDSYHVEHCLRLCQQ
YEVIDAAAFLLERVGDVGSALFLTLSSLDKKFHDLEAAVGGIVTNGASSGSNDSQHFSSV
LKLQEVKAVEVLLHACIGLCQRNTPRLNSEESETLWFKLLDSFCEPLIDSYNYRTASFEE
NQVQFLNESSASQKAKEAHIVTWRILKSNEAAHILRRLFSQFIREIVEGMTGYVHLPTIM
SRLLYDNGSQEFGDFKLTILGMLGTFGFERRILDTAKTLIEDDTFYTMSLLKKGASHGYA
PQSVVCCICNRLLIKSSSSYRVRVFNCGHATHLQCEDPDNEASGGDFICPICVHSNQSQR
SRSKAPSEYGLVNKFSSRTQSSSGASVSYPQETDLLELPYTLQQIPRFEILTNLQKNQRV
IDIENVPQLRLAPPTVYHDKVTKGYHLLVGESSSGKEKVERLNKSRQLTEVKVKRPSSLR
FPLKASLFGKEKTTNS
NT seq
5991 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcagtatttgcagaagagaaaaaggttcactattttggtgccgcctcagtcctca
cagcggaacgagctggcttcaagatcgagaatgacaaaggaactgactgacaacgaaacg
cttcctctaatggagctggacttgaatgccttcattcacgcacacctctccagcggcgac
ggcgacgacggcgacgacgacgatgacctatcattccctcaccgtagcatcgacgagatt
ctaaacgaatccagttcttccacctcatcccctccccattctcccccttcccgcggcctt
cgcaacaacgccgccggggacggcggggtctccacgtctccttctatatcaccgttcaag
tctccgttcgaggaaacaataaaggatcctgaaactccaagaagcaaccaatggaacgag
aagtcagttcaattgaaaccaggtgcggtctctcatgccaaggtcggtgaattaacggac
gacccgtttcgaaggggatctcgtccattgccatcgttgtttggaggggttagatcgaat
gcgaaacctggggcggcgcttgccgcagctgccgcggcttctcggtccacgccagccccg
cacgctgcagcaatcaagtcgaggagggcaggatatgggaacatggttctcgacgatgac
gagttggtttcctcttctgctgtcgagtcagagtttttctctgatagtttatatcatact
aacattcattcagaggactctggcgaaaagtcaatttcaatggtcgacaggattgctgat
tatcaggttgcatctatgaacgtcggcggtgaattgtgggaaagggacaacatcggagac
ggtgtcccatataatgacgagtttcttataactagagatatggaatgcgaagcagaaccg
agttctgtggatgatgtggatttcaacgagagcgctacaactctaccgcgagtgggagcc
aacaatagaagcctgtctggtcctgttcagaaaaatgtttgttcgatggagacacatcca
acagcattggatgtcgatgaatcaaatgaaggggctattccgtggtctatcgaacctgac
gatgagggaagttctgtgggctacgggagcctggagttggaaactcaagatttcgagaaa
tgtcttcaaccgtcaaaagatacggaggtggatcttgccattgaggatcccagtgaagtg
gacgatatcattgaattgggggaaacaaccgagcagttggacaactttcaaattggtgaa
cgtccagaaaggatgcccctgtcctcgaccaatccacttgaattggccgaagaaattgaa
aagaagcaggctttcactgcactgcattgggaagaaggcgttgctgcccaaccaatgagg
cttgaaggtattaagggaggcacaacaacattggggtacttcgacattcaagccgacaat
agtatttcaagaaccatttcatcacattcattcaagcgtgaacatggtttttcccaagtc
ttggctgttcatgcgaattatattgcagttggaatgtcaaaaggaaatattgttgtggtg
gctagtaaatcctcagctcaaaatggcgacaacatggatgcgaagatgttactgcttgga
tcacaaggagataaatcaactgcaccagtaacatctctatgctttaatcagcaaggggac
ctgcttctagctggttacagtgatggtcatattacagtctgggatgtgttgagggcatca
gcagcgaaggttatttccggagaacacacatcaccagttgttcattcattgttccttggg
caggaggctcaggttactcgacaatttaaagcagttaccggtgatagcaagggtctggtt
ttgttacatacgttctcagtggttcctttgctaaatagattctccaataaaactcagtgt
cttcttgatgggcaaaaaacggggactgttctatcagcttcagcacttcttttgaatgaa
ttctgtggaagttctttgccaccaactctttcaaatgccgcagtttcaaccagcagtatt
gggagcatgatggggggtgttgttggaggagattcaggctggaaactcttcaatgaagga
tcatcttttgtcgaagaaggagttgtcgtatttgctacccatcaaactgctctggtggtt
aggttgagtcccactgtggaagtgtatgctcagctctctaagccagatgggattcgggaa
ggttctatgccttacactgcttggaagtgctcacagtcttttgaaacttcaccttctgaa
gcagtagaaagggtttcgttgcttgcaattgcctgggataaaatggttcaggtagcaaag
ttggtgaaaacagagcttaaagtatgtggcaagtggtcccttgagagtgcagccataggt
gttgtctggttaaacgaccaggttcttgtcattctcacagtaacaggacaactcttctta
tttgagaaggatggaactatgattcaccagacaagtatatttgtagatggctttgataag
gaagatttcattgcatatcacacccactttgttaatgttttgggcaaccctgagaaggcg
tatcacaattgtgtggctgttagaggagcttctatatatgtattgggacctatgcatctt
gttatttcccgtctccttccatggaaggagcgggttcaggttctaaggaaagcaggggac
tggatgagtgcccttagcatggcaataaccatttatgacggccatgctcatggtgttatt
gatctccctaggtcgttggaatctttgcaggagttggtaatgccctttctgatcgagttg
ctgttatcatatgtggacgaagtgttttcatatatatcagtggccttctgtaaccaaatt
gaaaagaatgaaaaattggatgatgtgatgagtgaaagccattatgcacattctgaaata
aaagagcaatacaatcgtgttggtggagttgcagtggagttttgtgtccacatcactagg
actgatattctctttgatgaaattttctccaaatttgtgggtgttcaacagagagataca
tttttggagcttctagaaccatatattttaaaggacatgcttggatcgctgcctccggag
attatgcaagctttggtagagcattatagccacaaaggatggttgcagcgtgtagaacag
tgtgtgcttcacatggatatttcttccttagattttaatcaggttgttaggttatgccgg
gatcatggattgtatagtgcattggtatatcttttcaacaaaggattagatgattttagg
acacctttagaggagctgttggcagtgctacgaaccagtaagagcaaacgtgcttcctcc
cttgggtataagacacttgtttatttgaagtattgtttttcaggacttgcttttccacca
ggccaaggaactcttgctcattcacgcgtgcaatctcttagagatgaactgctacagttt
ttgttggagaattctgatccagtggatacaagatcaatttcaaataaatcatctgaagtt
ggatatttaaatttgtatcatctcttagagttagatactggagccactttagatgttttg
agatgtgcttttgttgaagacgaagtcctcaagaccaattcttctccagatggttcagtt
gatgcacgtatgcagctacgagaagaaaagaactcaatttctggaagaaagaactttcta
attcaaaatgtagtggatggtcttattcatgttctcgataaggctatctgtgaaacagat
gggtcccaagctggcgataatatcacattggttaacaactggccttcaaagaaggactta
attcatttgttcgactttgttgccacttacgttgcgtgtggaaaggctactgcctctaaa
gatgtggttggtcagattttggaacacctgatatccaaaagcgatattgcagaaacgacg
tctgattgtctgcctcatgttactgcaaatagtgtacattcaagaaaaagggaaaaacaa
gtactttccctattagaggtggttccagagacccactggaatccgtcttctgtgttgagg
atgtgtgagaaagcacaatttttccaggtttgtggcctaattcatagcatcagacgtcag
tattcatcagctttggatggctacatgaaagatttagacgaacccattcatgcctttgtc
tttatcaacagagcattactggagctcagcaattctgaacgaactgaatttcgggcagtg
gtcatttctcaaattccagagctttttaacttaaacagagaggcaacattcttcttggtc
atcgatcatttcaacaatgaggtttcagacatcctctcgcagcttcataatcatccaaga
agtctatttctgtacttgaaaactctcattgaggttcacctatctggaagcctggacttt
tcttgcttaaagaaagatggtaattttggggtcaactattcaactaaaggactggatgat
tacttgcaaaagctctccgatttccctaaatatctgtctaacaatcctgttgatgtgact
gatgatataattgagctttatgtgaagctactttgtcagtatgaacgtgaatcagttctc
aagtttttggagacttttgatagctaccatgtggagcattgtttgcgcctctgccaacaa
tatgaggttattgatgctgcagcattcttgttggagagggttggtgatgttggtagtgct
cttttcttaacactttctagccttgacaaaaaatttcatgacctagaggctgcggtggga
ggtattgttacaaatggtgcttcaagtggttctaatgattcacaacatttcagctctgtt
ttgaaattgcaagaggtgaaagctgtagaggttttgttgcatgcttgtattggactgtgc
cagcgaaatactccccgtttgaactccgaggagtctgagacactttggttcaaattactt
gactcgttttgtgagcctttaattgattcttataattatagaactgcttcttttgaagaa
aatcaagttcaattcttgaacgagtcatcagcttcacaaaaggctaaagaggcacacata
gttacatggagaattttgaagtctaatgaagctgcccatatattgaggagattattctct
caatttatcagagagatagttgaggggatgacgggatatgttcatcttccaactatcatg
tcccgacttctatatgacaacggaagtcaagaatttggcgattttaaacttaccatactt
gggatgcttgggacttttggctttgaaagaagaatcctggatactgccaaaactttgata
gaggatgacacattctataccatgagtttattgaagaagggggcgtctcacggatatgct
ccccagagtgttgtctgttgcatatgcaatcgtcttcttatcaaaagctcatcaagttac
agagtacgagtttttaactgtggtcatgcaactcatcttcaatgtgaagatcctgacaat
gaggcatcgggcggtgacttcatatgcccaatttgtgtccatagcaatcaatctcaacgg
tctagaagcaaagcaccgagcgagtatggtctagtgaataaattctcatcaagaactcaa
tcatcatcgggagcttctgtttcatatccacaagaaacagatttattggagctcccatat
actcttcagcaaataccacggtttgagatactgactaacttacagaaaaaccaaagagta
atcgacatagaaaatgtgcctcaactgaggcttgcaccaccaaccgtctaccatgacaag
gtcacaaaaggatatcatctcttagtaggagaaagcagcagtggaaaagaaaaagtagaa
agactaaataagagcaggcaactcacggaggttaaagtaaagagaccgtcctccctacga
ttccctttaaaagcaagtctattcggaaaagagaagacgaccaattcttga
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integrated database retrieval system
