Benincasa hispida (wax gourd): 120074954
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Entry
120074954 CDS
T07258
Name
(RefSeq) mRNA-decapping enzyme subunit 2-like
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120074954
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhj03019
]
120074954
Enzymes [BR:
bhj01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
120074954
Messenger RNA biogenesis [BR:
bhj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120074954
mRNA degradation factors
5'-3' decay
Decapping complex
120074954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP2
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-GeneID:
120074954
NCBI-ProteinID:
XP_038883995
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Position
4:complement(34541986..34546221)
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AA seq
322 aa
AA seq
DB search
MAALHHSSSTAPVKNVLPSQELLDDLCSRFVLNVPKEDLQSFERILFLIEYAHWFYEDNS
VERNPSLKSLNLKEFTSLLFKSCDVLKPYVAHIDDIFKDFTSYKVRVPVTGAIIMDETFE
RCLLVKGWKGSSWSFPRGKKSKDEEDHACAIREVLEETGFDITNLLNKSEYIEVIFGQQR
VRLYIIAGVKVDNIFAPQTKKEISEIAWHRLDDLEPASDNVISRGMNGLKLYMVAPFLAS
LRSWISTHHPPVHPNPDVSIRGLTVWKAKNSSIGSSSTIIMESQLSKQEVDVSIPDTGPG
RSFRNFKFDTASILQSMDRAFS
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcttcaccactcctcttccactgctccggtcaagaacgtccttccttctcaa
gaactcctcgatgatctttgcagtcgatttgttttgaatgtgccgaaggaagatctacaa
tcatttgagaggattctattcctcatagagtatgcacattggttttatgaagacaactcg
gtggaaaggaatccatctttaaagtcattgaatttgaaggagttcacttcattattgttt
aaaagctgcgatgttttaaaaccatatgttgcccatattgatgatatctttaaagacttc
acttcatacaaggttcgagttcctgtaactggggcaatcataatggacgagacatttgag
cggtgcttgttagtcaagggatggaaaggatcaagttggagttttccacgcggtaaaaag
agcaaagatgaggaagaccatgcttgtgccattagagaagtcctggaagaaacaggattt
gacattacaaatcttctcaacaaatctgaatacatagaggttatatttggacagcaaagg
gtgcggctttacatcattgctggtgtgaaagttgataatatcttcgccccgcaaactaag
aaagagatcagtgaaattgcatggcatcgactcgatgatcttgaaccagctagtgataat
gtaatatctcgtgggatgaacggtctcaagctttatatggttgctccttttttggcatct
ctgaggtcatggatttcgacacatcatccccctgttcatccaaaccccgatgtgtcaata
agaggactaacggtatggaaggctaagaacagctcgataggtagcagcagtacaatcata
atggagagccaattaagtaaacaagaagtggatgtttccatcccggacactggtccaggc
aggagcttcagaaacttcaagtttgatactgcctcaatcttacagtcaatggatagagcc
ttttcttaa
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