Benincasa hispida (wax gourd): 120075275
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Entry
120075275 CDS
T07258
Name
(RefSeq) phytochrome A-like
KO
K12120
phytochrome A
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
120075275
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GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HATPase_c
PAS_9
PAS_4
HisKA
PAS_8
Motif
Other DBs
NCBI-GeneID:
120075275
NCBI-ProteinID:
XP_038884425
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Position
4:30977413..30984507
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AA seq
1144 aa
AA seq
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MSSTSRPSQSSRNTGGGSSSSSQSRHSSRILTQTSIDAKLHSHFEQSGSSFDYSTSIHLT
TNPTAAPPTTTIAYLQHIQKSNLIQPFGCLLALHPTTLKLIAFSQNAPEMLATVAHTVPD
GDNHPLLAIGTDLRAIFTAPTATALLKALAFPDVTLLNPILVHSKSSGKPFYAILHRVTG
SIIIDFEPLKPDQVPVTAAGALQSYKLAAKAITRLQALPSGSLVRLCDTMVQEVFELTGY
DRVMTYKFHDDDHGEVFSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAK
HVKVIQDHNLDFDLTLCGSTLRAPHSCHLQYMENMDSIASLVMAIVVNEEEDEENFDQNN
NNNDASLQKYKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQILE
KNILRTQTLLCDMLMRDAPLGIVSRTPNIMDLVKSDGAALLYNNKIWRLGITPTDFHLQD
LASWIFEYHMDSTGLSTDSLYDAGYPGALALGDAVCGMAAVRISSEDMIFWFRSHTASEI
RWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILRNTFKDT
DDHMSEIHRKSIQTTLSDLKIIDGRQELESVTSEMVRLIETATVPILAVDVDGLVNGWNS
KIAELTGLSVEKAIGKHLLTLVEDSSVEIVKKMLVLALQGQEEKNVQFEIKTHNSDIESG
SISLIVNACASKDLSENVVGVCFVAQDITCQKIVMDKFTKLQGDYKAIVQNPNPLIPPIF
GLDEFGWCSEWNLAMTKLSGWSREAVLNKMLLGEVFGTQLNSKSCCCHLKNQEAFVNLGI
VLNNAMSGQDTEKNISFGFHAKNGIFVECLLCVNKILDKDGGVIGVFCFLQLASQELQQA
LSIQKLCERTALNRLKALGYMKRQIQNPLCGIIFSRKMLQQTQLGVEQKQLLHNSVNCQR
QISKVLDESHDLDHIIQGLIELEMVEFSLYEVLVVAISQVMMKSKGKGIQIENEVAEEIM
TETLYGDNLRLQQVMADFLLISVNYAPTGGQLMVSTNFTKAHLGNSVHLVHLEFRITYVG
GGIPESLLNEMFGNDEDPSEEGFSLFISRKLVKMMNGDVRYVREFGKSSFIITLELAAAH
KLRT
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaacaagtagaccaagccagagttccaggaacactggaggaggatcttcctcc
tcatcacaatcaagacacagctctagaatcctcactcaaacctccattgatgcaaagctt
cattcccactttgaacaatccggttcttcctttgactactccacttcaatccatctcacc
accaacccaacggccgcaccacccaccaccaccatcgcatacctccaacacatccaaaaa
tccaacctcatccaaccctttggctgcctcttagccctccaccccaccaccctcaaactc
atcgccttcagccagaatgcccctgaaatgctcgccaccgtcgcccacaccgtacccgat
ggggacaaccaccccctccttgctattggtaccgacctccgagccatcttcactgctccc
accgccactgccctcctcaaggccctcgccttccccgacgttaccctcctcaaccccatt
ctcgtccactccaagtcctcaggaaagcccttttacgccattctccatcgcgtcaccggt
agcattatcattgacttcgaacccctcaaacccgaccaagtccctgtcacggccgcagga
gctctccagtcctataagctcgcagccaaagccatcactcgtctccaagctctccctagt
gggagcctggttagactttgtgacaccatggttcaagaagtatttgagttgacaggttac
gatagagttatgacttataagtttcacgatgatgatcacggagaggttttttccgaggtt
acgaagcctggccttgaaccttatctaggtttacattatccagccactgacattcctcag
gctgctaggtttttgttcatgaagaacaaagttagaatgattgtggattgcagagccaag
catgtgaaagtcattcaagatcacaaccttgattttgatttgactttgtgtgggtccact
ttaagagctcctcatagttgccatttgcaatatatggaaaatatggactctattgcctct
ttggttatggccattgtagtgaatgaagaggaagatgaagagaactttgatcaaaataac
aacaataatgatgcttctttgcaaaagtataagaggaaaaggttatggggtttggtggtt
tgtcataacacaactcctagatttgttccttttcctcttagatatgcttgtgagtttcta
gctcaagtttttgccattcatgtcaacaaggaattggagttagagaatcaaattctggag
aaaaatatcctgagaactcaaacacttttatgtgacatgttaatgagagatgctccttta
ggaatcgtgtcaaggactcctaatataatggatcttgtcaaatctgatggagctgcatta
ttgtacaataacaagatatggagattggggataaccccaactgattttcatcttcaggat
cttgcttcatggattttcgaatatcatatggattccactggtttgagtactgatagcttg
tacgatgctgggtaccccggtgcactggcactaggtgatgcggtgtgtgggatggctgct
gtgaggatatcttccgaggacatgattttctggttccgatcgcacactgcttcggagatt
cggtggggcggggcgaagcatgagccaggtgagaaggatgatggaaggaaaatgcatcca
agatcatcttttaaggcttttcttgaagtggttaagacaaggagtttgccttggaaggac
tttgaaatggatgcaattcattctttgcaacttattttaaggaacacctttaaagataca
gatgatcatatgagcgagattcatagaaaatcaatacaaacaacacttagtgacctcaag
attattgatgggaggcaagaattggaatcagtaacaagtgagatggttagattgattgaa
acagccactgttccaattttggctgttgatgtagatgggcttgtgaatgggtggaactca
aaaattgctgaattgactggactctctgttgagaaagctattggcaagcatttgctcaca
ttagtggaagattcttctgttgaaattgtcaagaagatgttggtcttggcattgcaaggt
caagaggaaaaaaacgttcaattcgagataaaaacacacaactcagacatcgaatcgggc
tccataagtctaatagtaaatgcttgtgcaagcaaagacttaagtgaaaatgtggtggga
gtgtgctttgtagcacaagacataacatgtcaaaagatagtaatggacaagttcacaaaa
ttacaaggtgattacaaagccatagtacaaaaccctaatccactaatccctccaatattt
gggttagatgaatttggttggtgctcagaatggaacttagcaatgacaaaactaagtgga
tggtctcgtgaagcagttctcaacaaaatgcttttaggagaagtatttggaacacaatta
aactccaaatcatgttgttgccatctcaagaatcaagaggcttttgtgaatcttgggatt
gtattgaacaatgcaatgagtgggcaagatactgaaaagaatatctcatttggttttcat
gctaaaaatgggatatttgttgaatgtctattatgtgtcaataagatattggataaagat
ggtggagttattggggttttttgcttcttgcaacttgcaagtcaagagctgcaacaagca
ttgagtattcaaaaactatgtgagaggactgctttgaataggttgaaggcactgggatat
atgaagaggcagattcaaaatcctctttgtgggattattttttcaaggaaaatgttgcag
caaactcaattgggagtggaacagaagcaacttttgcataatagtgtcaattgtcaaagg
caaatctccaaggttcttgatgagtctcatgatcttgatcatattattcaaggtttaatt
gaattagaaatggttgagttttcattgtatgaagtattggtggtagcaattagtcaagtg
atgatgaagagcaaagggaaaggtattcaaatagaaaatgaagttgctgaagagatcatg
actgagaccttatatggagacaatttgagacttcaacaagtcatggctgatttcttgttg
atatcagttaattatgcaccaacaggaggccaacttatggtttcaacaaatttcactaag
gctcatttaggaaactcagtacatcttgtgcatcttgaattcaggataacatatgttgga
ggaggcataccagaatcattgttgaatgagatgtttgggaatgatgaggatccatctgaa
gaaggtttcagcctatttataagtagaaaattggtgaagatgatgaatggagatgtgaga
tatgtgagggaatttgggaagtcaagcttcatcataactcttgaacttgctgctgctcat
aagttaagaacctaa
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