KEGG   Benincasa hispida (wax gourd): 120075300
Entry
120075300         CDS       T07258                                 
Name
(RefSeq) splicing factor U2af large subunit A isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
bhj  Benincasa hispida (wax gourd)
Pathway
bhj03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bhj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120075300
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bhj03041]
    120075300
Spliceosome [BR:bhj03041]
 Complex A
  U2 snRNP components
   U2 related factors
    120075300
 Complex B
    120075300
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded DUF1418
Other DBs
NCBI-GeneID: 120075300
NCBI-ProteinID: XP_038884475
LinkDB
Position
4:56440465..56447596
AA seq 613 aa
MGGMKVMEKMQTTMSMVFLPKLVVPATVATILTVIPNLSMVLGIMKESLQKVEKKKEIRG
VIGTGTGIETEVEKGIERKARMGKEIGRRIEIGIGIVTKTVIGIVTAITETVTGIEVRGG
KGAEVEMMMITTGVETMTGGEIMIKNEKTGIDVGLVLAQREYMSIGQGPLLHRGQDHAPK
ANELVVLTWLLRQLQYCLVQLLLQAMLDYLPLCADNGRELTSVAFMCKKDQYTAGQIPGT
TPAIPGMFPTMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFF
SQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRR
PSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELL
ESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGA
NQPKPEQESVLLHAQQQIALQKLMLQPGTVSTKVLCLTQVVSPEELINDEDYEDIMEDMR
GEGGKFGTLVNVVIPRPRPNEAAPGVGKVFLEYADIDSATKARAGLNGRKFGGNQVMAVF
YPENKFAQGEYDA
NT seq 1842 nt   +upstreamnt  +downstreamnt
atgggaggtatgaaggtaatggagaagatgcagacaactatgtcgatggtttttctcccc
aagctcgtggtgccagccacggtggccacgatactcacagtgattccaaatctcagcatg
gttctagggattatgaaagagagtcttcaaaaagtcgagaaaaagaaagagataaggggc
gtgatagggacagggacagggatcgagaccgaggtcgagaaagggatagagagaaaagca
aggatggggaaagagatcgggagaaggatagagatagggatagggatcgtgacaaagacc
gtgatagggatcgtgaccgccatcacagagaccgtcacagggatcgaggtgagaggaggg
aagggggcagaagtagagatgatgatgattactacaggagtagagactatgacaggcgga
gagattatgataaagaacgagaagacaggcatagacgtaggtctcgttctcgctcaaagg
gaatacatgagcataggtcaaggtccccttctccatcgcggtcaagatcacgctccaaaa
gcaaacgaattagtggttttgacatggctcctccgacaactgcaatattgtctggtgcaa
ctgctgctgcaggcaatgttggactacttgcccctctgtgctgacaatgggcgtgagctg
acttctgtagcttttatgtgcaagaaggaccaatacaccgcaggtcagattcctgggaca
actccagctattcctggaatgtttcctaccatgtttccactggcaactggtcagcccttc
ggggcgcttcctgttatgccagttcaggcaatgacacagcaggctactagacatgcacgg
cgtgtttatgtgggagggctaccaccgacagcgaacgaacagtctgttgccacatttttc
agccaggttatggcagcaataggaggaaataccgctggccctggagatgcggttgtcaat
gtatacattaatcatgagaaaaagtttgcttttgtggagatgagatctgtcgaggaagcc
agtaatgcaatggccttggatgggatcatctttgagggagcacctgtaaaggtgcgaaga
cctagtgattacaatccttctcttgctgcaacgcttggtcccagccagccaaaccccaat
ctgaacctagctgccgttggtctaactccaggttctgctggtggtcttgagggtccagat
cgcatttttgtgggtggacttccctattacttcacagaagctcaggtcagggagttgctg
gagtcttttgggccactacgaggttttgatctcgtgaaagatagagagactggaaattca
aaaggatatgcattttgtgtttaccaagatctttcagtcacagacatagcctgtgcagca
ctcaatggtattaaaatgggcgataagacactcactgttcggcgtgcgaatcaaggagcc
aatcaacccaaaccagagcaagaaagtgttcttttacatgcacagcagcaaattgcgtta
cagaagcttatgctacagcctgggactgtatccaccaaggttctttgtcttacacaagtt
gtttcccctgaagagcttattaatgatgaagactacgaagatatcatggaagacatgcga
ggggaaggcggaaaatttggtacattagtgaacgttgttatcccgcgtccgagacccaat
gaagcagcacccggagttggaaaggtgtttttggagtatgcagacattgacagcgcaacg
aaagctcgagctggtttgaatggaaggaaatttggagggaaccaagtgatggctgtattc
tatcctgagaacaagtttgcccaaggggagtatgatgcctaa

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