KEGG   Benincasa hispida (wax gourd): 120075348
Entry
120075348         CDS       T07258                                 
Name
(RefSeq) protein RRC1-like isoform X1
  KO
K12842  U2-associated protein SR140
Organism
bhj  Benincasa hispida (wax gourd)
Pathway
bhj03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bhj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120075348
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bhj03041]
    120075348
Spliceosome [BR:bhj03041]
 Complex A
  U2 snRNP components
   U2 related factors
    120075348
 Complex B
    120075348
SSDB
Motif
Pfam: Surp RRM_1 cwf21 CID CTK3 RRM_7
Other DBs
NCBI-GeneID: 120075348
NCBI-ProteinID: XP_038884579
LinkDB
Position
4:1668258..1684849
AA seq 958 aa
MSSFSITRKKTPFQKHREEEEAKKKREEDETARLYAEFVESFQGDNAPGSKTFVRGGTIN
PNEKLKSESEGEKSKDGVSVPKKGSRYVPSFIPPPLASKGKESDKKELEKPKEKEKGKSR
NIDHFMEELKHEQELRERRNQDREHWREGRHGEISTPSSRFDELPDDFDPSGKFPGSFDD
GDPQTTNLYVGNLSPQVDENFLLRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMNR
ADGQAAKDEMQGVVVYGYELKIGWGKSVALPSQALPAPPPGHMAIRSKEGGTVILSGSSG
PPVTSVPNQNSELVLTPNIPDITVEPPEDDHLHHVIDTMALYVLDGGCVFEQAIMERGRG
NPLFNFLFELGSKEHTYYVWRLYSFAQGDTLQRWRTEPFIMITGSGRWVPPPLPTAKSPE
LEKESGPTYAAGRSRRVELERTLTDSQRDEFEDMLRALTLERSQIKEAMGFALDNADAAG
EIVEVLTESLTLRETPIPTKVARLMLVSDILHNSSAPVKNASAYRTKFEATLPDIIESFN
DLYRSITGRITAEALKERVLKLLQVWSDWFLFSDAYVNGLRATFLRLGNSGVIPFHSLCG
DAPEIERKANCDDLGDGSKINQDAELAMGKGGAMKELMNLPFGELERRCRHNGLSLVGGR
EMMVARLLSLEEAEKQSGYELDEDLKYSNSHSGRYSSSSRETKAERDPAEISGWNRFGDN
EADFQRMGSVPMAQTLSIPQPELKGFTKSGKNDPVLPASKWAREDDESDNEQKGGARGLG
LSYSSSGSENAGDGPSKADEMEITTEASVLMQPDSGLNEEQRQKLRRVEVALIEYRESLE
ERGIKSAEEIERKVLIYRKQLESEYGLTDSNETASRKKRRDRPDDSHDSSRKLHRSQSHS
DSPVRKLLNRDRDRENDMDRERDRSRDRDREKSGSRERDDHERDRGKERDRDRRKRGK
NT seq 2877 nt   +upstreamnt  +downstreamnt
atgagttcattttccatcactcggaagaagactcctttccagaaacacagggaggaggaa
gaggcaaagaagaagagagaggaggatgaaactgctcgattgtatgcggaatttgtggag
tcatttcaaggagataatgcacctgggtctaagacttttgttcgtggaggaactatcaac
cccaacgagaagttgaagagtgaatctgagggtgaaaagtccaaagatggggtatctgtt
ccaaagaagggaagtagatatgtgccatctttcattccacctccattggcatccaaggga
aaagaatctgacaagaaggagctggaaaagccaaaggagaaagaaaaggggaagtctagg
aacatcgatcattttatggaggagctgaagcatgagcaagagctgagggaaagacgaaat
caagatcgtgaacattggcgggagggacgccatggagaaatctcaacaccatctagtcga
tttgatgaactgcctgatgactttgatcctagtggaaagttccctggatcatttgatgat
ggagatcctcaaacgactaacctttatgtaggaaatttatctccacaggttgatgagaat
tttcttcttcgaacttttggaagatttggaccaattgctagtgtaaagataatgtggcca
aggacagaggaggaacgaagacgacaaagaaattgtggatttgtagctttcatgaataga
gctgatggccaagctgcaaaggatgaaatgcagggagttgttgtttatggatatgaactg
aaaattggatggggaaagtctgttgctcttccatcccaagcattacctgcacctcctcca
ggtcatatggccattagaagtaaggagggtgggactgttatcttatctggctcatcagga
ccgccagtcacttctgtcccaaatcaaaattctgaactggttctgacacccaacattcct
gatattaccgttgaaccacctgaggatgatcatctccaccatgtcattgacactatggct
ctttatgttctggatggaggttgtgtctttgaacaagctattatggagaggggtcgggga
aatcctctcttcaacttcttgtttgagcttggttcaaaagaacatacttattatgtttgg
cgactttattcatttgctcagggggatactcttcaaaggtggagaactgaaccttttatc
atgataactggtagtgggagatgggttccaccgcctcttccaactgctaaaagcccagag
cttgaaaaggagtctggtcccacttatgctgctggaagaagcagacgcgtggagcttgaa
agaacattaactgattcgcaaagggatgagtttgaggacatgcttcgggcattgacacta
gaaaggagtcagataaaggaagcaatggggtttgcattggataatgctgatgcagctgga
gagatagttgaagttctaacagaatctttaacgcttagagaaactcctattccaaccaag
gttgcaaggttgatgcttgtgtctgatatccttcataacagtagtgctcctgtaaagaat
gcatctgcataccgcacgaaatttgaagcaacattacctgacatcattgagagcttcaat
gatctatatcgcagcataacagggagaattacggcagaggccctcaaggaacgagtactg
aaattattgcaagtttggtccgattggtttctattctcagatgcttatgtgaatggattg
cgagccacgttccttcggttgggaaactctggtgtgatcccttttcattcattatgtggt
gatgcccctgagattgaacggaaggccaattgtgatgatttaggagatgggagtaaaatc
aatcaagatgctgaattggcaatgggcaaaggaggagccatgaaggagttgatgaatctt
ccctttggagaattggaaagaagatgcaggcataatgggttgtctcttgttggtggtaga
gaaatgatggttgctcgtttgctaagtcttgaagaggcagaaaaacagagtggatatgaa
cttgatgaagacttaaaatatagtaattctcattctggaagatattcaagtagctcaaga
gagactaaagctgaacgagatccagcagaaatttctggttggaaccgttttggggataac
gaggcagatttccaaagaatgggttctgtgcctatggctcaaactctttccattccacaa
cctgaactaaaaggcttcactaagtctgggaagaatgatcctgttttgcctgcctctaaa
tgggctagggaggatgatgaaagtgacaatgagcaaaaaggaggtgctaggggtctcggt
ttgagttattcatcttctggaagtgaaaatgcaggtgatggtcctagtaaagctgatgag
atggagattactacggaggcaagtgtcctcatgcaacctgatagtgggttgaatgaagag
cagagacaaaagttaagacgtgtagaagtggctttgattgaatatcgtgagtccttggaa
gaacggggcatcaaaagtgcagaggaaattgagagaaaagttttgatatatcggaaacaa
ctagaatctgaatacggactgacagattccaatgagactgcatcaaggaagaagaggagg
gatagacccgatgatagccatgattcatcaaggaagctgcaccgtagccagagccatagt
gatagcccagtacgaaagttattgaatcgagacagagacagggaaaatgacatggacagg
gagcgagacagatcacgagacagagaccgcgaaaagagtggtagcagagaaagggatgat
cacgaacgagatagaggtaaagaaagagatagggataggagaaaacgaggaaaataa

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