Benincasa hispida (wax gourd): 120075414
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Entry
120075414 CDS
T07258
Name
(RefSeq) DNA mismatch repair protein MLH1-like isoform X1
KO
K08734
DNA mismatch repair protein MLH1
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03430
Mismatch repair
bhj03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
120075414
03460 Fanconi anemia pathway
120075414
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bhj03400
]
120075414
DNA repair and recombination proteins [BR:
bhj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
120075414
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
120075414
NCBI-ProteinID:
XP_038884719
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All DBs
Position
4:60164915..60200061
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AA seq
736 aa
AA seq
DB search
METHANDEIIPMDTGSEEEVVPCKEPPKILRLDESVVNRIAAGEVIQRPVSAIKELVENS
LDAQSTSVNVVVKDGGLKLIQVSDDGHGIRYEDLPILCERHTTSKLSTFEDLQSIKSMGF
RGEALASMTYVGHVTVTTITKGQLHGYRVSYRDGVMEHEPKPCAAVKGTQITVENLFYNM
TARRKTLQNASDDYTKIVDLLSRFAIHHINISFSCRKHGAARADVHSVGPTSRLDAIRTV
YGASVARNLMKIEVSENDEACSGFKMDGLISNSNYVAKKITMVLFINGRMVECSALKRAI
EIVYAATLPKASKPFIYMSIILPTEHVDVNVHPTKKEVSLLNQEVIIERIQSAVESKLRS
SNDMRAFQGQDVESSEACQMVLSNDDTQNSLQSGSKSHKVPVHKMVRTDSTDPAGRLHAY
VQMKPPGLPESNLTAVRSFVRQRRNPKDSANLTSIQDLVAEIDKNCHAGLLDTVRHCVYI
GMADDVFALLQHGTHLYLANVVNLSKELMYQQVLRRFAHFNAIQLSNPAPLYELFILALK
EENANSECENDDFNEKVAETSTKLLKLKAEMLEEFFCIHIDRNGNLAKLPVVLDQYTPDM
DRVPEFMLSLANDIDWEDEKICLQSISAAIGNFYAMHPPLLPNPSGDGLQFYKRIKPFGN
SEDENIGDDEVGMDNEIDHGLLSEAETIWAQREWSIQHVLFPSMKLFFKPPRSLAENGTF
VRIASLEKLYKIFERC
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggaaactcatgcgaatgacgagattattcccatggacacaggtagcgaagaagaagta
gttccttgtaaagaaccccccaaaatcctccgactcgacgagtccgtcgttaatcgaatc
gctgccggagaggttattcaaaggcctgtttccgccattaaagagctcgtcgaaaacagc
ctcgacgcccaatccacctctgtcaacgtcgttgtcaaagacggtggcctcaaactcatc
caagtttccgacgacggccatggcattcgttatgaagatttgcccattttgtgcgagagg
cacacgacgtccaagttgtcaacatttgaggatttacagtccattaagtcaatgggattt
cgaggagaggctctggcgagcatgacctatgtaggtcatgttacggtcaccaccattact
aaaggacaactacacggttatagagtatcctatagagatggagtgatggagcatgagcct
aagccatgtgctgctgtaaaaggaactcagataacggttgaaaatctgttctataacatg
acagctcggaggaagacactacaaaatgcatctgatgattacacaaagattgtggacctc
ctaagtcgttttgctattcatcatataaacatcagcttttcttgcagaaagcatggagct
gccagagcagatgttcactcagttgggccaacttcaaggttagatgccattcgtacagtt
tatggtgcatcagttgcccgcaatctaatgaaaatagaagtttcagaaaatgatgaagcc
tgttcaggtttcaagatggatggtctaatctccaactcaaattatgttgcgaagaagatc
acaatggtgctctttatcaatggaagaatggtggaatgcagtgctttaaaaagagctatt
gaaattgtttatgctgcaactttacccaaagcatccaaacctttcatatatatgtcaatt
atactgccaactgagcatgtagacgtgaatgttcacccgaccaaaaaagaggtaagcctc
ctgaaccaggaagttattatcgagaggatacaatcagcggttgaatcaaaattgagaagt
tctaatgacatgagggcatttcaaggacaggatgttgaatcttctgaggcttgtcaaatg
gttcttagcaatgacgatactcaaaattccttgcagtctgggtcaaaatcgcacaaggtt
ccagtgcataaaatggttaggacagattcaacagatccagctggaaggttgcacgcatat
gtgcaaatgaagcctcctggcctccccgaatctaacttgactgctgtgaggtcttttgta
agacagagaaggaatccaaaggactctgctaatcttactagcattcaagatcttgttgca
gaaattgataagaattgtcatgctggtctccttgacactgtacgacattgcgtatatatt
ggaatggcagatgatgtatttgcgctgcttcagcatggaactcatctgtatctagcgaat
gttgtgaacttgagcaaagaactcatgtaccagcaagttttacgtcgatttgctcatttt
aatgccatacaattaagcaacccagcccctctgtacgagttatttattttggcactgaag
gaggaaaatgcgaattcagagtgtgagaatgatgattttaatgagaaggtagctgagacg
agtacaaaactgctcaagttgaaagctgagatgctggaggagtttttctgcatacatatt
gacagaaatgggaatttggctaaacttccagttgtactcgatcaatacacacctgatatg
gaccgtgttcctgagtttatgctttctttggctaatgatattgattgggaggatgagaaa
atttgtctccagtcgatttcagctgccatcgggaatttctatgctatgcatcctcccttg
ctgcccaatccatcaggtgacggcttgcagttctataaaaggataaaaccattcgggaat
tctgaagatgaaaatataggtgatgatgaggtgggaatggataacgaaattgaccatgga
ctactatcagaggcagaaactatatgggctcaacgtgaatggtcgatacaacatgtactc
tttccatcaatgaagctgttcttcaagcctccacgttctctggccgaaaatggtactttc
gttcggattgcatcattggagaaactttacaaaatctttgagagatgttga
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