Benincasa hispida (wax gourd): 120075437
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Entry
120075437 CDS
T07258
Name
(RefSeq) F-box protein SKP2A isoform X1
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120075437
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bhj04121
]
120075437
Ubiquitin system [BR:
bhj04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
120075437
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_4
F-box-like
LRR_At5g56370
F-box
LRR_8
F-box_4
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
120075437
NCBI-ProteinID:
XP_038884756
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Position
4:complement(45245047..45249774)
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AA seq
377 aa
AA seq
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MVGKENLRTEDLNLCFEKLMMVVGGGDGMDVGAKGVKMDGGLIAGWKDIPMELLLQIVSL
VDDRTVIVASGVCRGWRDAICFGLVHLSLSWCKKNMNNLVLSLAPKFAKLQTLILRQDKP
QLADDAVETIASYCHDLQALDLSKSFKLSDLSLYALAHGCHDLKRLNVSGCTAFSDTALA
YLASYCRKLKVLNLCGCVKAASDTALQAIGQYCNHLQSVNLGWCENVSDVGVMSLAYGCP
DLRTLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCRKNKPTKWG
TGKGKNDDDGLRTLNISQCTALTPPAVQAVCDSFPALHTCSGRHSLIMSGCLNLMSVHCA
CAIQAHRAPTAFPHSAH
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggttggtaaagagaacttgaggactgaagacttgaatttatgctttgagaaactaatg
atggttgttggtggtggtgatggaatggatgttggtgccaaaggagttaaaatggatggt
gggctgatagcaggatggaaggacattcctatggagcttctcttgcaaattgtatccctt
gttgatgatcgaactgttattgtagcttcaggcgtgtgtcgtggatggcgggatgctatt
tgctttggcctcgtccatctttccctctcatggtgcaaaaagaacatgaacaacttggtc
ctatcccttgctcctaaatttgcaaaactgcaaactctaatcttgcgccaggataaaccc
cagcttgccgacgatgctgttgagaccattgctagttactgtcatgatctgcaggccctg
gacctgagcaaaagtttcaagctcagcgatctttccctatatgctctggctcatggttgt
cacgaccttaaaagacttaacgttagtggttgtactgcattcagtgacactgcactggct
tatctggccagttattgcagaaagctaaaagttcttaatctatgtggatgtgtcaaggct
gcatctgacactgcattgcaggctatcggacaatactgtaatcatttgcagtcagtaaat
cttggatggtgtgaaaatgtgagtgatgtgggtgtgatgagtttggcatatggatgtcct
gatcttcgaaccctagacttgtgtggctgtgtcctaattacagatgatagtgtgattgct
ttggcaaatatgtgccctcatctgaggtcccttggcctctactattgtcaaaacataaca
gacagagcaatgtattctttggcacatagctgtagaaagaacaaacctacaaaatgggga
acagggaaaggcaagaatgatgatgatggacttcggactcttaacataagccaatgcacg
gctcttactcccccggctgtacaggcagtttgcgattcgtttccggctctccacacgtgc
tcaggtcgccattctctcatcatgagtggctgtctaaatttgatgtctgtgcattgtgct
tgtgcaatccaagctcaccgtgctccaactgcttttcctcattcagctcattga
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