Benincasa hispida (wax gourd): 120075625
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Entry
120075625 CDS
T07258
Name
(RefSeq) DNA gyrase subunit A, chloroplastic/mitochondrial
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
bhj
Benincasa hispida (wax gourd)
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bhj03032
]
120075625
03400 DNA repair and recombination proteins [BR:
bhj03400
]
120075625
Enzymes [BR:
bhj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
120075625
DNA replication proteins [BR:
bhj03032
]
Prokaryotic type
DNA Topoisomerases
120075625
DNA repair and recombination proteins [BR:
bhj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
120075625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Syntaxin-18_N
Motif
Other DBs
NCBI-GeneID:
120075625
NCBI-ProteinID:
XP_038885119
LinkDB
All DBs
Position
4:167988..222708
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AA seq
927 aa
AA seq
DB search
MASSSGLRISSLLRHQLAPPSVSNRFVRICHGLSELRFLSTANSTSSRSIRLVKSRRRDE
PVKEGGTDGQDGNGSLTVKDRGGSDGRIVHAELHKEATDAYMAYAMSVLLGRALPDVRDG
LKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLRC
PLIQGHGNFGSIDADPPAAMRYTECRLEALAEAMLLSDLELNTVDFVPNFDNSQKEPSLL
PARLPTLLLNGSSGIAVGMATNIPPHNLGELVDALCVLIHNPEATLQELLEYMPGPDFPT
GGLIMGNNGILEAYRTGRGRVTVRGKIDVELLDLKTKRTAIIIKEIPYQTNKSALVEKIA
ELVENKTLDGISDIRDESDRSGMRIVIELKRGADPLIIQNNLFRLTSLQSSFSCNMVGII
NGQPKLMGLKELLQAFLDFRCSVVERRARFKLSQAQERRHIVEGIVIGLDNLDGVIHLIR
EASSNSIASASLRTQFNLSEKQAEAILDINLRRLTHLERKKFIDESKSLMENISKLEELL
SSRKNILQLIEQEAIELKNKFPSPRRSILEDTDSGQLEDIDVIPNEEMLLALSEKGYVKR
MKPSTFNLQHRGTIGKSVGKLRVNDAMSDFIVCRAHDHVLYFSDKGIVYSARAYKIPECG
RTATGTPLVQILSLSDGERITSIIPVSEFDGEQFLLMLTANGYIKKVSLNFFSAIRTTGI
IAIQLVSGDELKWVCCCTNDNLVAMASQNGMVILSSCDIIRSQGRNTRGAVAMRLKAGDK
MASMDIIPAAVWNDLEKMPTTPRGSSKGFNGPWLLFVSESGFGKRVPLSSFRLSPLNRVG
LIGYKFSLEDRLAAVFVVGFSLAEDGESDEQVVLVSQSGTVNRIKVRDVSIQSRYARGVI
LMRLDHAGKIQSASLISATDTEPEEEA
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttcttctggactccgtatatcttccctgcttcgccatcagctcgctccacct
tcggtgtccaatcgtttcgttagaatctgccatgggttgtcagaacttcgctttctatct
accgcgaattccacatcctccaggtccatccgattggtgaaatcccggcgcagagacgag
cctgtgaaagagggagggactgacgggcaggatggaaatggcagtttaactgtgaaggat
agaggtgggagtgatggaaggattgttcatgcagagcttcacaaggaggctactgatgct
tacatggcttatgcaatgtccgtgttgctcggccgtgccttaccagatgttcgcgatggt
ttgaaacctgtccaccgccggattttgtttgccatgcatgaattgggactttcatcaaga
aaaccatttaagaaatgtgcaagagttgttggagaggttttaggtaagtttcatccgcat
ggggatactgctgtgtatgattcccttgttagaatggctcaggatttctctttaaggtgc
ccactcatccaaggccatggaaattttggttccattgatgcagatcctcctgctgccatg
cgttatacggagtgcagattggaagcacttgcagaagcaatgttgttgtctgacttggag
ctgaatacggttgattttgttccaaattttgataattctcaaaaggaaccttcacttcta
ccagctcggttgccaactttgttgctgaatggttcctcagggattgcggttggaatggca
accaatattccaccgcataatcttggcgagttagtagatgcactctgtgttcttattcat
aatccggaggctacattgcaagaattgttggaatacatgcctggacctgactttccgact
ggtggattaattatgggaaataatggtattttagaggcatatcgaactggacgtggacgt
gttacagttagggggaaaattgacgttgaactgcttgatttaaaaactaaacgaactgcc
attattataaaggagataccttaccaaacaaataaatctgctttggtggagaagatagcg
gaacttgtggagaacaagacactggatggtataagtgacattagggacgagagtgatcgg
tctggaatgcggattgtaattgagcttaagcgaggagcagatccattaattattcagaat
aatctatttcggcttacatctcttcagtctagttttagctgcaatatggtgggtatcatt
aatggacaacctaaactgatgggtctgaaggaattgttgcaggcatttttggactttcga
tgttctgttgtagagagacgtgcaaggtttaagctatcacaggcacaagagagaagacac
atcgtagagggtattgttatcggacttgataatttggatggagttattcatttgataagg
gaagcttccagcaattctattgcatctgctagtctgaggactcaattcaatctttctgaa
aaacaagctgaagctatattggacattaaccttaggagacttacacacctcgagaggaag
aagtttattgatgaaagtaaatccttaatggagaatatttccaaattagaggagctgttg
tctagcaggaagaacatactgcagttaatagaacaagaagcaattgagctgaaaaacaag
tttcccagccctaggcgttcaattttagaagacactgatagtggtcaacttgaagacatc
gatgtcattccaaatgaagagatgcttttggcacttagtgaaaaaggatacgttaagcgg
atgaaacccagcaccttcaatcttcagcatcgtggaacaattggaaaatctgttggaaaa
ctgagagttaatgatgcaatgtcagactttattgtttgtcgtgcacatgaccatgttcta
tacttcagtgataaaggaatagtctattcagctcgtgcctataaaattccagaatgtggc
cgaactgctactggcactccattagttcagatcctatctttatcagatggagagagaata
acctccataatccctgtgagtgaattcgatggcgaacagtttctactaatgctcacggca
aatggttacatcaagaaagtatctttgaacttcttttcagcaatcagaacaactggaatt
atagccattcaattggtgagtggtgatgagctaaaatgggtctgctgttgcacaaatgac
aatcttgtggcaatggcttctcagaatggaatggtcattttaagttcttgtgatattatc
cgctcacaaggcagaaacaccaggggtgcagtggccatgagactaaaagctggggataag
atggcaagcatggatataattccagctgctgtgtggaatgatttagaaaagatgccaaca
actccacgtggcagctccaagggctttaatggtccatggctcttatttgtgtccgaaagt
ggatttggaaagcgagttccattgagcagtttccgcttgtctcctttaaatagagttggt
ttgattggatacaagttttccttagaggatcgcttggcagctgtttttgtagttggattc
tcattggcagaggatggtgaaagtgatgaacaagtagttctagtaagccaaagtggtaca
gttaatagaataaaggttcgggatgtttctatacaatctcgctatgccaggggagtaatt
ttaatgaggctggatcatgctggaaagatccagtccgcttctttgatctcagctacggat
acagaacccgaagaagaagcttaa
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