Benincasa hispida (wax gourd): 120075700
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Entry
120075700 CDS
T07258
Name
(RefSeq) LOW QUALITY PROTEIN: cleavage stimulating factor 64
KO
K14407
cleavage stimulation factor subunit 2
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120075700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhj03019
]
120075700
Messenger RNA biogenesis [BR:
bhj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
120075700
U7-dependent histone pre-mRNA processing factors
120075700
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
CSTF2_hinge
CSTF_C
partial_CstF
RRM_7
Motif
Other DBs
NCBI-GeneID:
120075700
NCBI-ProteinID:
XP_038885247
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Position
4:40252830..40261761
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AA seq
525 aa
AA seq
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MASSQHRCVFVGNIPYDATEEQLIEICQEXGPVVSFRLVIDRETGKPKGYGFCEYKDEET
ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGGPTPQGESSQHQP
IGLHIAITAAAVMAGSLGGAQAASSQNTLQSATMPNDPLTLHLAKLSRSQLTEVMSGLKA
MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLWQPSTHTRLPLHEIQQG
QPSSLQIQPGLPPLAPNRMQTGFVPKKETQLSLTPQNPLAPHQFSASRPPLQSQIQPSHA
LQGSLTGIPGGSSLPSISLQGNISVRQQVQVPTSSSLKQHMRPPQQYSGHGGALIPGHNA
HIANPEAKPSLLPHPSLSDADFQPGPSTAYGASPIVGSDVDKSSQVPLGVDGKRNVLHGF
SGTTNRPVKQIKLEDGKGSPFSAGGLSASLGTNGSGQLGISSDPNLAGTQHSEKPTSLLP
HNVESVLLQQVLNLTPEQLNLLPLEQRLQVVELQHALRRDQMRPS
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctctcagcatcgttgtgttttcgttgggaatataccttatgatgctactgaa
gagcagcttatagaaatctgccaagaangtgggcctgtagtgtcgttcagattagttatc
gatagggaaactggaaaaccaaagggctatgggttttgtgagtacaaggatgaagaaaca
gcattgagtgctcgtcgtaatcttcaaggttatgaaattaatggccggcagttacgagtt
gattttgctgagaatgacaagggggcagacagaaatagagaacagggtcgtggtggacct
ggattggttgcaaatgctggtggcccaacaccccaaggggaatccagtcaacatcaacca
attggtcttcatatagctataactgctgcagccgtcatggccggatcccttgggggtgca
caagcggcgtctagtcagaatactttgcagagtgcaacaatgcccaatgatcctttaact
ttacatctggctaaactttctaggagtcagcttactgaagttatgtcagggctaaaggca
atggctacacaaaacaaggatttggctcgtcagctattgctggcaagaccacaattatct
aaagctcttttccagtcacagataatgcttggaatggtcactccacaagtgttgcagaag
cctaatttatggcaaccttcgactcatactcggcttcctttgcatgaaattcagcagggt
cagccatcatctcttcaaattcaaccagggctaccccctcttgcacctaacaggatgcaa
actggttttgtacccaaaaaagaaactcaattgtctctcacgccccaaaatcctttggct
ccccatcagttttctgcatcccggcctccacttcaatctcaaattcagccatcacacgct
ttacaaggctctttgaccggaatacctggaggctcgtcgcttccttccataagtttgcag
ggaaatatatctgttaggcaacaggttcaggtgcccacctcctcttctttaaagcagcat
atgcgtcctcctcaacaatattcggggcatggtggggctttaattcctgggcataacgct
catattgctaacccagaagctaaaccttctcttttgcctcatccttccttatcagatgca
gactttcagcctggaccctccaccgcatatggtgcatctccgattgtgggcagtgatgtt
gataagtcttctcaagttcctcttggtgtggatggtaaaagaaatgtacttcacggcttt
tcaggaacaactaatcggcctgtaaagcaaataaaattagaggatggaaaaggcagccct
ttctcagcaggaggtctaagtgcatcactaggtaccaatggatctggacaacttggaatt
tcctcagatcccaatctggcgggaacgcaacactctgagaaaccaacttcattgcttccc
cacaatgtcgagtctgtactactgcaacaagttttgaatctaactcccgaacagcttaac
ttgttgccgctcgaacagaggctgcaagttgttgagctccagcacgcacttcgcagagac
caaatgcggccatcctag
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