Benincasa hispida (wax gourd): 120075965
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Entry
120075965 CDS
T07258
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj00040
Pentose and glucuronate interconversions
bhj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120075965
Enzymes [BR:
bhj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
120075965
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
120075965
NCBI-ProteinID:
XP_038885657
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Position
4:14312324..14314592
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AA seq
408 aa
AA seq
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MENPIIFLLIITFFSVLLQIWSVSSSPIADPEVVVQEVLTSINNATARRNLGFLSCGTGN
PIDDCWRCDPNWENNRKRLADCAIGFGKRAIGGKNGKYYVVTDPSDKDVVNPKPGTLRHA
VIQKEPLWIIFKRDMVIKLKAELLMNSFKTIDGRGASVHIAGGPCITIQFVTNIIIHGIN
IHDCKQGGNTYVRDSPEHYGWRTVSDGDGVSIFGGSHIWVDHCSLSNCRDGLIDAIHGST
AITLSNNYMTHHNKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNN
DYTHWIMYAIGGSASPTINSQGNRYLAPNNKDRKEVTKREDAPQSKWKNWNWRSDGDLML
NGAFFTRSGAGASSSYARASSLSAKSSSLVSSMTAGAGVLRCRKGSRC
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatcccattatttttcttttaataataacatttttcagtgttcttctccaaata
tggtctgtttcatcttctccaatagccgatccagaagttgttgtccaagaagttctaacg
agcatcaacaatgcaacagcaagaaggaatttggggttcctatcctgtggaaccggtaac
ccaatagacgactgctggcggtgcgatcccaattgggaaaacaaccggaagcggctagcc
gactgcgccattgggtttggaaaacgagccatcggcggcaaaaacggcaaatactacgta
gtcaccgacccctccgacaaggacgtggtgaacccaaaacccggcactcttcgccacgcc
gtaatccaaaaagaacccttatggatcatcttcaaacgcgacatggtcatcaaattgaag
gcagagcttctgatgaactctttcaaaaccatcgacggccgtggcgcctccgtccacatc
gccggcgggccttgtattaccattcaatttgtgaccaacattataatccacggcatcaac
attcacgattgcaagcaaggtgggaatacgtacgtcagagactcgccggagcattacggt
tggaggactgtgtcggacggcgatggagtttcgatatttgggggcagccatatttgggtt
gaccattgctctttgtctaattgccgtgatgggttgattgatgccattcatggatcgacg
gctataactctttcaaacaattacatgacccaccataataaagttatgcttttaggacat
agtgattcctacactcaagacaagaacatgcaagtcaccattgcttttaaccattttggc
gaaggccttgtgcaaagaatgccacgatgtcgtcatgggtatttccatgtggtgaataat
gactatactcattggataatgtacgcaattggtggaagtgcatctcctactatcaatagt
caaggaaatcgataccttgctcccaataacaaagatagaaaagaggtgacaaagcgagag
gatgcaccacaaagcaaatggaagaactggaattggaggtcggatggagatttgatgttg
aacggagcattcttcacaaggtccggtgctggagcgtcatctagctacgcaagagcatcg
agcttgagtgcaaaatcgtcgtcactagtgagttcgatgacagcgggagcaggggtgcta
cggtgtcgaaaaggttctcgatgttag
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