Benincasa hispida (wax gourd): 120075982
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Entry
120075982 CDS
T07258
Name
(RefSeq) uncharacterized protein LOC120075982
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120075982
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhj03021
]
120075982
03019 Messenger RNA biogenesis [BR:
bhj03019
]
120075982
Transcription machinery [BR:
bhj03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
120075982
Messenger RNA biogenesis [BR:
bhj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
120075982
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUFIP1
FKBP15
Motif
Other DBs
NCBI-GeneID:
120075982
NCBI-ProteinID:
XP_038885674
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All DBs
Position
4:40948946..40955368
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AA seq
598 aa
AA seq
DB search
MIRPPGGSSQQLPNTSLANSGNGFQNQAPFCNPNPHLNNLHGNPVPNMPPPMFQPGLMMN
LQNPLMGLPNNPLCASPFAPGHVGFANSAANYPAQGQFNLVPNVNQMNMNTCLPLAQFFG
QNMPNLVQQLGQNMGLNNGQFCLPFQNMNQHVIPGQMMNMSQVPSHTSYGGPNQQAIPMP
FQNPGFSTIQPFGVNQAMHPVNQNPQNFTPQAMGGAGSNQLPASAQPLQGNSTMLLNSST
QPQQARNLQSPAFVGSQGNSSISDGGNGSNSFSNNLAHRNFTRNSKKGFQKNQNHHMKNE
KKKFGFPGGQKGKGFHNERRNKFGDANSTDQVKDQKRSLSLVYTDQEIRQWREARRKNYP
SSTNVQKKLTEKQTDCTLVDKEAQLLRKELKEILAKQAELGVEVAEIPPEYLSYSEKHNN
RKHRRDPSTLGEEGKGASVGKEKSRNRFNKRGRPEKKNRSRKKGKSEKHLSNKPQLKKRE
PTLLQKLLQADVRREKSQLLQALRFMVMNSFFKEWPNKPLKFPSVMVKENADEINMVDEN
SLSIGNFNLQETNNSVVENNGSHEIDSDNENDDDDRDNNEKFKGDEIQVLEEEGEIID
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgattcgtcctcctggcggttcttcacaacagttacccaatacatctctcgcgaattcc
ggcaatgggtttcaaaatcaggcccccttctgcaatcccaacccccacttgaacaatctc
catggaaaccctgttcccaacatgccacctcccatgtttcagccgggattgatgatgaat
ttgcaaaaccctctcatggggttgcctaataatcctctttgtgcttccccttttgccccg
ggccatgtgggttttgcaaattctgctgctaattatccagctcaggggcagttcaatttg
gtgccgaatgtgaatcagatgaatatgaacacttgtttgcctctagcgcagttttttggg
cagaacatgccgaatttggttcagcaattgggtcagaatatgggtttaaataatgggcaa
ttttgtttaccctttcaaaatatgaatcaacatgtaattcctggacagatgatgaatatg
tcgcaagttccttctcatacttcgtatggtggtccaaatcaacaagctattccaatgcct
tttcagaatcctggcttctctacaatccagccttttggtgtcaatcaggcaatgcaccct
gttaaccaaaatccccaaaacttcactccacaagcaatgggtggtgctggatcaaatcaa
ttgccggcttcagctcaaccgttgcaggggaattcgaccatgctgttaaactcttcgact
caaccacaacaagctaggaacctgcagtcacctgcttttgttgggtcacagggtaattct
tcaataagtgatggtggaaatggatcaaattcattttcgaataatttagctcacaggaat
ttcacgaggaactcaaaaaaaggatttcagaagaatcaaaatcatcatatgaaaaatgag
aagaaaaagtttgggtttcctggcggacagaaggggaaaggttttcacaatgagaggagg
aacaaatttggtgacgctaactccacagatcaagtgaaagaccagaagagatctctctct
ttggtctatacggatcaagaaattcggcaatggcgtgaagcacgccggaagaattatcca
tcatcaaccaacgtacagaagaaactcactgaaaagcaaactgactgcacattggttgat
aaggaagctcagcttttgcgaaaagaactcaaagagattttagcaaagcaggctgaatta
ggagttgaagttgcagaaataccaccagagtatctctcatattcagagaaacacaacaat
cgaaaacaccgtagagatccatcgacattaggagaggaaggcaaaggagcctcggtaggg
aaagaaaaatctcgaaacaggttcaacaagaggggaagacccgagaaaaagaatcgttcg
agaaagaagggaaaatcagagaagcatttgtcaaacaagccgcaattaaagaagagagag
ccaacattattgcagaagctcttgcaagcagatgtgaggagagaaaaaagccagttgtta
caagctttgagattcatggtgatgaattctttcttcaaagaatggccgaataaacccttg
aagtttccttctgtcatggtcaaagagaacgcagatgagattaatatggttgatgagaat
tctctgtctattgggaacttcaatctccaagagacaaacaattcagtggttgaaaacaat
ggtagtcatgagattgacagcgataacgaaaatgacgatgatgacagagacaacaatgag
aagttcaaaggagatgaaatacaggtactcgaagaggaaggagaaattattgattga
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