Benincasa hispida (wax gourd): 120075987
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Entry
120075987 CDS
T07258
Name
(RefSeq) nuclear pore complex protein NUP85 isoform X1
KO
K14304
nuclear pore complex protein Nup85
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120075987
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhj03019
]
120075987
03036 Chromosome and associated proteins [BR:
bhj03036
]
120075987
Messenger RNA biogenesis [BR:
bhj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120075987
Chromosome and associated proteins [BR:
bhj03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
120075987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Retrotran_gag_2
Motif
Other DBs
NCBI-GeneID:
120075987
NCBI-ProteinID:
XP_038885681
LinkDB
All DBs
Position
4:complement(21605337..21611889)
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AA seq
719 aa
AA seq
DB search
MPGPAFDSYPGDALVLSSLEAREVVYPLRHELKPPIARLSISWARGNSFRVSIFKQQCGD
HSSDSDDGEVGGQVLEVKIRNGDGETSAAEFRRIAYGSVSPFALLQSRKRMVSGLSKMSM
GLSRFNPDGWEYLAEYSKDISSVIGNPKSIPSSAIEDPLEILKKVKEPTCLKAAWELMDV
FYADKQSHWWLNERLVDWLAEYDSVLSTTQSTIHSKLLDFRKELNNLQVVEDNPSYWDLI
LSALAVGWQEIVVKMLRLHGSYQLDQLSNRETENGLVEAVAFLISEMPRMRPELDSGTFG
ECFKTKPDFTKAWEKWRSKITKLDGSAFWVQCAHVQTRKGLRNMLQIILGNVESLSGATC
NWMELYISQLLYVRPFAMGLESMYNLAERCMQLKPASKTDRLMGLIIGILGESTEVVLAE
CSRGFGPWMVTHAMELLTKESDQAEILLQEERHDLGGVSIEELHRLVYAQVLCSHAFTLQ
IAPIYLTSCAKQGIGFLETLLYSQAVQHNGMLLKNLEICRLYELDSLSSNIMKIAGVYHW
KHGRKGCGVFWLRQAGDEVRLNKIAQQLFDSVGKSISDESFKQWDGLIELLGSESKNTGG
LEFLHKYSDFKKSLHQVHNKGKTTGVAQSAVDSLIALMKNPSTPQRFWLPILNDSLKLID
WHEGPLLNVEQTNLLLNKLQELSMARLRPDFVESDLPPLALSSIRLALAKNLGRAFLEG
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgccaggccccgcctttgattcttatcccggcgatgccctagtcttgtcctctttggag
gctcgagaagtggtctatcctctccggcacgaacttaagcctcctatagctcgattatcc
atttcctgggccagaggcaactccttccgtgtttccattttcaagcagcagtgtggtgac
cattcctcagactctgatgacggtgaagttggcggacaagtattggaggtgaagatcaga
aacggagacggagaaactagtgctgcagagtttcggaggatcgcgtacggttcagtctcc
ccctttgcgcttcttcagagtcggaaacgtatggtttcgggattgtcgaagatgtcgatg
ggtttgtcacggtttaatccggatgggtgggaatacttagcggagtatagcaaggacatc
agttcagttattggtaatccgaagtcaattcctagctcagcgattgaggatcccctggaa
attttgaagaaagtcaaggagcctacttgtttgaaagctgcatgggagctgatggatgtg
ttttatgccgacaagcagtctcattggtggcttaatgaacgccttgttgattggttagct
gaatatgatagcgtcctctcaaccacacaatcaacaatccattcaaaacttcttgatttt
cgaaaagagctcaataacttacaggtagttgaggataatccaagttattgggatttgatt
ttatcagcattagcagttggctggcaagagattgtggtgaaaatgttgcgcctacatgga
tcttatcagctggatcagcttagcaatcgggagacagagaatggactggtagaggcagtg
gcttttcttatttcagaaatgccacgcatgcgccctgagttggattctggtacatttggc
gaatgcttcaaaactaagcctgattttaccaaggcatgggaaaaatggcggtcgaaaata
accaagttggacggctctgcgttttgggttcaatgtgctcatgttcagaccagaaaaggt
ttgcggaacatgcttcagatcattctaggaaatgttgagagcctcagtggtgcgacctgc
aactggatggagctgtatatctctcagcttttgtatgttagaccattcgcaatgggtcta
gaaagcatgtacaaccttgcagaaagatgtatgcagttaaaaccagcttctaaaactgat
cgcttgatggggctaataattggaattcttggagaaagtacagaggttgttttagcagag
tgttctagaggatttggcccctggatggttacacatgccatggaattattgactaaagag
agtgatcaagcagaaatccttctacaagaagagcgccatgatcttgggggagttagcata
gaggaacttcatcgtcttgtttatgctcaggttctctgttcacatgcatttactttgcag
atagctccgatttacttaacatcatgcgcaaagcagggaattggttttctagaaactttg
ttatacagtcaagctgttcaacataatgggatgctacttaagaatttagagatatgccgt
ttatatgaactcgacagccttagttcaaacattatgaagattgctggagtttaccattgg
aagcatggtcggaaaggttgtggagttttttggcttaggcaagctggggatgaagttcgc
cttaacaagattgcccagcaattgtttgattcagttggaaagtccatatctgatgaaagt
ttcaagcaatgggatggattgattgaattgttgggttctgaatctaagaatactggaggg
cttgagtttctccacaagtacagtgatttcaaaaaatcgcttcatcaggttcataacaag
gggaaaactacaggtgttgcacagtctgcagtagactctctcattgcgcttatgaagaac
ccgtcaacacctcagcgcttttggctaccaattttaaatgactcgttgaagcttattgat
tggcacgaaggtcctctactaaacgttgagcagaccaaccttttgttgaataaactacaa
gagctgtcaatggcaaggcttcgacctgactttgtcgaatctgacttgccacctctggcc
ttgagctccatcaggctggctcttgccaaaaatcttggacgtgcttttctcgaggggtga
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