KEGG   Benincasa hispida (wax gourd): 120076203
Entry
120076203         CDS       T07258                                 
Name
(RefSeq) cleavage stimulation factor subunit 50-like
  KO
K14406  cleavage stimulation factor subunit 1
Organism
bhj  Benincasa hispida (wax gourd)
Pathway
bhj03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:bhj00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    120076203
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bhj03019]
    120076203
Messenger RNA biogenesis [BR:bhj03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     120076203
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_IFT122_1st WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_EML_2 WD40_WDHD1_1st WDR55 EIF3I Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_NWD2_C WDR90_beta-prop_4th Beta-prop_EML ASA1 Cytochrom_D1 Beta-prop_DCAF4 Beta-prop_EIPR1 Beta-prop_SCAP Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_VPS8 Beta-prop_WDR75_1st Beta-prop_Aladin DSE1_N CFAP251_N PAC11 Beta-prop_WDR41 Beta-prop_NOL10_N WD_LRWD1 NBCH_WD40 Beta-prop_IFT140_1st Retrotran_gag_2
Other DBs
NCBI-GeneID: 120076203
NCBI-ProteinID: XP_038885897
LinkDB
Position
4
AA seq 261 aa
MRYKGNGNIREYIIKISNLADKLKTLDIKINENLHVHLVTFLKKAFRVIQDTHNVRSISL
HPSGDYLLAGTDHPIAHLYDVNTFQCFLSANVPEIGNNGAINQVRYSATGSMYVTASKDG
AVRLWDGVSAKCLRSIVNAHGTAEATSAKFTKDERYVLSCGKDSSVKLWDVGTGRLVKQY
VGATHMQLRCQAVFNDTEEFVLSIDEPSNEIVIWDALTAERVARWPSNHVGAPRWLEHSP
TESAFISCGTDKSIRFWKEIL
NT seq 786 nt   +upstreamnt  +downstreamnt
atgaggtataaaggcaatgggaacataagggagtacattataaaaatatccaatctcgca
gataaattaaaaacacttgatatcaagataaatgaaaatttacatgtacatttggtcaca
tttctaaagaaagcatttagagttatccaggatacccataacgtgcgttctatatctctt
catccttcaggagattatctcttagcaggaacggatcatccgattgcccacctatacgat
gtcaatacttttcagtgttttctatctgcaaatgttccagaaataggaaataatggagcc
ataaatcaggtcaggtattcagcaacaggcagtatgtatgtcactgcttcaaaagacggt
gcagttcgtttatgggatggtgtgagtgcaaaatgtcttcgctccattgttaatgcacat
ggcacagcggaggcaaccagtgcaaaatttacaaaggatgaaaggtatgttctctcttgt
ggaaaggactcgagtgtaaagctttgggacgtggggacggggagattggtcaaacaatat
gttggagctactcatatgcaattgaggtgtcaggctgtcttcaatgatactgaggagttt
gtgctatcaatagacgaaccaagcaatgagattgttatatgggatgctttgacagcagag
agagtagcaaggtggccttcgaaccatgtcggtgcacctcggtggctcgagcactcacca
acagagtcagccttcatttcctgtgggaccgataaatcgatacgtttttggaaggaaatt
ctctag

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