Benincasa hispida (wax gourd): 120076319
Help
Entry
120076319 CDS
T07258
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2 isoform X1
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
120076319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhj03021
]
120076319
Enzymes [BR:
bhj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
120076319
Transcription machinery [BR:
bhj03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
120076319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
120076319
NCBI-ProteinID:
XP_038886021
LinkDB
All DBs
Position
4:17453451..17497897
Genome browser
AA seq
1173 aa
AA seq
DB search
MVVKFNENEDYEALRELFRHHIESFDHFVDAGLETLMNSIKPVEIYDSFTNKKLRIWLGK
PELYPPQKERNLRTIREALLPYECRQAKISYTGKFMADVCFQYDEKAVIREKFNFGHFPI
MLKSKLCHLRGLDPTKLISYKEEASEMGGYFIMNGLERVVRLLIAPKRNYPMSMVRNSFS
DRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDT
TDHEIYASLTSCYSDKHGKGKGAVGTELVGERAKIILDEVRDLALFDHRQCLEHIGQHFQ
PVMEGLGKEKYSTIADAVLKRYIFVHLDNNYDKFNLLIFMAQKLFSLVDQTSVPDNPDSL
QNQDVLLPGQLITIYLKEKLEDWLQKVKKLLQDEISNPNKNFEFCSLAHVKKVMDKNPSK
QISLAVENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRGASFAGLRTT
TVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFFKIRTSILSVL
IAVGMIPSLPKLVQMGPPDVLNVLLDGRIVGYISSSEVEKIVAHLRRLKVLSSHVIPEDL
EVGYVPLSISGAYPGLYLFTSPSRFIRPVKNLSISSEDNQNIELIGPFEQVFMEIRCPDG
GDGGRKDEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIRY
RADQKLYHLQTPQTPIVRTSTYMKYNIDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVE
RGMYHGQIYQTETIDLSDQGNRSSRSQKIFRRSNIDTSVRSIIDSDGLPYVGQMIHPDEP
YCSIYDEVAGTTRTMKLKGSEAVIVDYVSVDVKNKKHPQKVNIRFRHPRNPVIGDKFSSR
HGQKGVCSQLWPDVDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLNGEFV
NATPFRSSVKKTNVGDEESNAETLVDELGSTLIKRGFNYHGLEVLYSGVYGTELTCEIFI
GPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKGRKKGGGIRFGEMERDSMLAHGASYLL
HDRLHTCSDHHIADVCSLCGSILTSSIVQPQKRAVREIGGLPPGKAHKRVTCHACKTSKG
METVAMPYVFKYLAAELAAMNIKMTLQLSSGAA
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgaaatttaacgagaacgaagactatgaggcgttgcgcgagctgttcagacat
catatagaatcgtttgatcactttgttgatgcgggattggagacacttatgaacagcatc
aaacccgtcgaaatctacgactccttcaccaacaaaaagcttagaatttggttgggcaag
cccgagttatacccgccacagaaggagcgcaatttgagaacaattcgggaagctctgctt
ccttatgaatgtaggcaagctaaaatttcatataccggaaagttcatggcagatgtttgt
tttcaatatgatgaaaaagctgtcataagagagaagtttaattttgggcacttcccaata
atgttgaagtcaaagctttgtcacttgagaggtcttgatcccacgaagttgatctcttac
aaagaagaggcatcagaaatgggtggttatttcattatgaatggactggagagagttgtt
cgactgctgatagcacccaaacgaaactacccaatgagtatggtgaggaattcattttct
gatcgacgggaaggttatactgataaagcagtggttataaggtgtgtaagagaagatcaa
tcttcagtaacagtcaaattatattatcttaggaacggaagtgccagacttggattttgg
gttcagggaaaggagtacttgcttcccataggggttgtactaaaggccctaattgacaca
accgaccatgaaatatatgcaagtctgacaagctgttatagtgataaacatggaaaaggt
aagggtgctgttggaactgagcttgttggtgaaagggcaaagattattctcgatgaagtt
cgggacctggcactgtttgatcatcgtcaatgtctagagcatataggacaacacttccag
ccagtcatggaggggctgggaaaagaaaaatattctactattgcagatgcggttctcaaa
cgctacatatttgttcacctcgacaacaattacgacaagttcaatctgcttatttttatg
gcgcagaaactcttctcccttgtagatcagacgtctgtacctgacaaccctgattccttg
caaaaccaggacgttctgctacctggtcaactgattactatttatctcaaggagaaacta
gaagattggttgcaaaaggtgaaaaagcttcttcaagatgaaattagtaatcccaacaaa
aattttgaattctgcagcttagctcatgtcaagaaggtcatggacaagaatccatcgaaa
cagattagtttagctgttgaaaatatgttgaaaactggaagactcgttacacaaacaggc
ctagatctgcagcagagagcaggctttacagttcaggccgaacgacttaatttcttgcgc
tttgtgtctcattttcgtgctgttcatcgtggagcttcctttgctggacttcgcactaca
acagtgcggaaattgctacctgagtcttggggttttctttgtccagtacacactcctgat
ggggaaccatgtggcttgctgaatcatttaaccagcacttgcagaattacatcatacttc
aattctcaaggaaaagttagggacttcttcaaaataaggacgtctattctgagtgttcta
attgcagttggaatgataccatccctaccgaagcttgttcaaatgggtccccctgacgtt
cttaatgttcttttagatggtcgcatcgttggttatatatcatccagtgaagtagagaaa
attgttgctcatttacgacgattaaaagttttatcttcccacgtgattcctgaagatctg
gaagttggatatgtacctttgagtataagtggagcatatcctggtttataccttttcaca
tctccttctagatttattcgaccagttaaaaatctttcaatctcttctgaggacaatcaa
aatattgaactcattggcccatttgaacaggtatttatggaaatacgatgtcctgatggg
ggtgatggtgggaggaaagatgagtttcctgcgacacatgaagaaatccatccaactggg
atgcttagtgtggttgctaatcttaccccctggtctgatcacaatcagagcccacgtaat
atgtaccaatgccagatggcaaaacaaacaatggcattctccctgcaagctattcggtac
cgcgcagatcaaaagctataccatcttcaaactcctcaaacccctattgttcgtacgagt
acatatatgaaatacaacatagatgaatatccaactggcacgaatgcaatagtggcagtg
ttggcatatactggttatgacatggaggatgcaatgattctgaacaagtcctctgtggag
cgtggaatgtaccatggacaaatatatcagacagaaactattgacttgtctgatcagggc
aatagatcaagtcgaagtcagaagatctttaggaggagtaatattgatacatctgtgcga
tctatcatagattcagatgggctcccttatgttggtcagatgatacacccagatgagccc
tattgtagcatttatgatgaggttgcaggcacaaccagaaccatgaaacttaaaggttca
gaagctgttattgttgattatgtgtctgttgatgtgaagaataagaagcaccctcaaaag
gtgaatatacgcttccgacatccccggaatccagtgattggagataaatttagtagtaga
catgggcagaaaggtgtttgctcccagctatggccagatgttgatatgccattttgtgga
gctacaggaatgcgcccggatttgattatcaatccccatgcttttccttcgagaatgaca
attgcaatgttgatggagtctgtcgctgctaagggaggatgtttaaatggagaatttgtt
aatgcgacaccgtttaggagttctgttaagaagactaacgttggagatgaagagtcaaac
gccgagacacttgttgatgaacttggctccacgttaattaaaaggggatttaattaccat
ggtcttgaagtattgtacagtggggtttatggaacagagctaacatgtgaaatttttatc
ggacctgtatattatcagcgtcttcggcacatggtttctgacaaatatcaggttcgttcc
actggaactgtggatcaagtaactcggcaacccatcaaaggtagaaaaaaaggtggtggt
atacgttttggtgaaatggagcgcgactccatgctagcacatggagcatcgtacttatta
catgataggcttcatacatgttctgatcatcacattgctgatgtatgttcactttgcggt
agcattcttacatcatctatcgtccagccccagaagcgtgccgtgcgtgaaattggtggg
cttcccccggggaaggctcataaaagggttacgtgtcatgcttgcaaaacaagtaaaggt
atggagacagtggcaatgccttacgtctttaagtacttggctgcagagttggcagcgatg
aacataaaaatgactctccagctaagtagtggagctgcctga
DBGET
integrated database retrieval system
