Benincasa hispida (wax gourd): 120076452
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Entry
120076452 CDS
T07258
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
bhj
Benincasa hispida (wax gourd)
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
120076452
Enzymes [BR:
bhj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
120076452
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
120076452
NCBI-ProteinID:
XP_038886212
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Position
4:complement(35586119..35594417)
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AA seq
642 aa
AA seq
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MPPLGVQLFITERQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNVLEVLNDESNRGYWDLV
WNSSASTTGLFDVIKSTGFEVIVENEDQVELSFTRSWDLSLEGKLVPLEIDKRFIMLRGS
SGFYSYAIYQHLKEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRYMPLPDDRSPPRGRA
LAYPEAVLLVDPIEPELLGEVDDKYQYSCDNKDSGVHGWISTDPAVGFWLITPSNEFRSG
GPVKQNLTSHVGPTTLAVFISAHYTGEDLVPKIGADEEWKKVFGPVFIYLNSTYDSTDAL
QLWEDAKAQATIEVQSWPYSFPASDDFPKLNQRGSISGRLLVRDSYVSGDLIPANGAFVG
LAPPGDVGSWQRESKGYQFWSRADESGKFSIDGVRPDDYNLFAWVPGFIGDYRYDALIGI
TEGIEIDMDDITYEPPRQGATIWEIGIPDRSAAEFYVPNPNPNYVNKLYLNHPDKFRQYG
LWERYSELYPDADLVYTVGISDYTKDWFFAQVTRKTENGTYKGTTWQVKFELDNVDNKAT
YKLRIALASASLAELQVGVNEAKAKPVFSSGLIGRDNSIARHGIHGLHWVYNVDIPGNRL
VTGDNTIFFTQPRSTGPFQAIMYDYIRLEAPPPPPSSAHPLE
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgccgcctctgggtgtgcaactctttattacagaacgtcaggtgacgatggataatggc
atagtccaagtcacgttatcaaacccagatggcatagtgactggaattcgatataatgga
gtcgacaacgtgctcgaagttctcaacgatgaatctaacagagggtactgggacctcgtg
tggaactcatcagcgtccacaactggattgtttgatgtgataaagtctacgggttttgag
gtcatagtggaaaatgaagaccaagtggagctctcctttaccagatcatgggatctgtct
ctcgagggaaagcttgtgcctttagagattgataaaaggtttataatgctccggggttcg
tctgggttttactcctacgctatttaccaacacttgaaagaatggcctggtttcaacctt
ggtgaaaccagactcgccttcaaactcagaaaggacaagttccactatatggccatggca
gacaacagacagagatacatgccgcttccagatgatcgctctccgccgagaggtcgagcc
ctggcatacccggaggctgtcctgctcgtcgaccccattgaaccagagctcctgggagag
gtggatgacaagtatcagtactcatgtgacaacaaagatagtggcgtccatggatggata
tccaccgatccggcagtcggattctggctaatcacccccagcaatgagtttcgatccggt
ggacccgttaaacagaaccttacttcacacgtcggcccaaccactctagctgtttttata
agcgcccattacacaggagaggatttggtgccgaaaattggagccgatgaggagtggaag
aaagtttttggccctgtattcatctatctcaactccacttatgattccaccgacgcactt
caactctgggaagatgccaaagctcaggcgacgatcgaagtccaaagttggccttacagc
tttcctgcttcggatgattttccaaagttaaatcaacggggcagtatcagtggtagacta
ttagtcagagatagctacgttagtggagacttgataccagcaaacggtgcgtttgttggc
ctggctccaccaggagacgttggatcatggcaacgagagagcaagggttaccaattttgg
agtagagcagatgaaagtggaaaattttccatcgacggcgtaaggcccgacgactacaat
ctgtttgcatgggtccccggttttattggagattatcgttacgatgctctcatcggcatt
acagaaggcattgagatagacatggatgacataacatacgagcctccgagacaaggagct
acaatctgggaaataggaatccctgatcgctcagcagcagagttctatgttccaaatcca
aatcccaactacgtcaataagctctatcttaaccatcctgataagtttcgacagtacggt
ctctgggaaagatacagtgaattgtatcccgacgcagacttggtttacaccgttggcatt
agtgactacactaaggattggttcttcgctcaagtcaccaggaagacagaaaacggaaca
tataagggaacaacatggcaagtaaagttcgagctagacaatgtcgacaacaaagcaact
tacaagcttcggatcgcattggcctccgcttctctcgcagaattgcaggttggagttaat
gaggccaaggcaaagccagtgttctcgagtggactgatcggaagggacaattcgatcgcg
agacacggcattcacggcctgcactgggtatacaacgtggatattccgggcaaccggctg
gttaccggcgacaacaccatcttcttcacgcaacctagaagcacaggcccttttcaagcc
attatgtatgattatattcgtctggaagctcctccacctcctccatcctccgctcatcct
ttggaatga
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