Benincasa hispida (wax gourd): 120076595
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Entry
120076595 CDS
T07258
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj04142
Lysosome
bhj04144
Endocytosis
bhj05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120076595
04142 Lysosome
120076595
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
120076595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bhj04131
]
120076595
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bhj04147
]
120076595
Membrane trafficking [BR:
bhj04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
120076595
Exosome [BR:
bhj04147
]
Exosomal proteins
Proteins found in most exosomes
120076595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
Motif
Other DBs
NCBI-GeneID:
120076595
NCBI-ProteinID:
XP_038886395
LinkDB
All DBs
Position
4:complement(63018141..63030687)
Genome browser
AA seq
1741 aa
AA seq
DB search
MAAASAPITMKEAITLPSIGINPQFITFTHVTMESDKYICVRETAPQNSVVIIDMNMPMQ
PLRRPITADSALMNPNSRILALKAQVQGSTQDHLQIFNIEMKSKMKSHLMPEQVVFWKWI
TPKTLGLVTQTSVYHWSIDGDSEPVKVFERTANLANNQIINYRCDPSEKWLVLIGIAPGS
PERPQLVKGNMQLFSVDQQRSQALEAHAAAFAQFKVPGNENPSTLISFATKTLNAGQITS
KLHVIELGAQPGKPSFTKKQADLFFPPDFADDFPVAMQISHKYSLIYVITKLGLLFVYDL
ETAAAVYRNRISPDPIFLTAEASSVGGFYAINRRGQVLLATVNEQTIISFVSGQLNNLEL
AVNLAKRGNLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ
TGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLGDDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRTDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHAFLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLYVRALQVRLLLATIFLFQFYNAFS
LYGLMLGLLPFSTYLQHYTELPDIKRVIVNTHAIEPQSLVEFFGTLSREWALECMKDLLL
VNLRGNLQIIVQVAKEYCEQLGVDACIKLFEQFKSYEGLYFFLGSYLSSSEDPDIHFKYI
ESAAKTGQIKEVERVTRESNFYDAEKTKNFLMEAKLPDARPLINVCDRFGFVPDLTHYLY
TNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPEDFIKGLILSVRSLLPVEPLVDECEKR
NRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDSNNNPEHFLTTNPYYDSRVVGKYCEKR
DPTLAVVAYRRGQCDDELINVTNKNSLFKLQARYVVERMDGDLWEKVLNPENEYRRQLID
QVVSTALPESKSPEQVSAAVKAFMTADLPHELIELLEKIVLQNSAFSGNFNLQNLLILTA
IKADPSRVMDYINRLDNFDGPAVGEVAVEAQLYEEAFAIFKKFNLNVQAVNVLLDNIQSI
ERAVEFAFRVEEDAVWSQVAKAQLREGLVSDAIESFIRADDATQFLEVIRAAEDANVYHD
LVRYLLMVREKAKEPKVDSELIYAYAKIDRLAEIEEFILMPNVANLQNVGDRLYDEALYE
AAKIIFAFISNWAKLAITLVKLKQFQGAVDAARKANSAKTWKEVCFACVDAEEFRLAQIC
GLNIIIQVDDLEEVSEYYQNRGCFNELISLMESGLGLERAHMGIFTELGVLYARYRHEKL
MEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYIQYDEFDNAATTIMNHSPEAWDHMQFK
DVAVKVANVELYYKAVHFYLQEHPDLINDLLNVLALRVDHTRVVDIMRKAGHLLLVKPYM
IAVQSNNVSAVNEALNGIYVEEEDYDRLRESIDLHDNFDQIGLAQKIEKHELLEMRRVAA
YIYKKAGRWKQSIALSKKDNLYKDAMETASQSGDRELAEELLVYFIEQGKKECFASCLFV
CYDLIRADVALELAWINNMIDFAFPYLLQFIREYTGKVDELVKDKIEALKEVKAKEQEEK
DVIAQQNMYAQLLPLALPAPPMPGMGGGPGMPGFAPAPPPMGGLGMPPMPPFGMPPMGSS
Y
NT seq
5226 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgccagcgctccgatcaccatgaaggaagccataacgcttccgagcattgga
attaatccgcaattcattacgttcacgcacgtgacaatggaatcagataaatatatttgc
gtccgagaaacagcaccgcagaacagtgttgtgattattgatatgaacatgccaatgcaa
ccattgaggaggcctataactgcggactcggcacttatgaatcctaattctagaatattg
gccttgaaagctcaagtccaggggtcaactcaagaccacctacaaatattcaacatcgag
atgaagtcaaagatgaaatcacatttgatgcccgagcaggttgtcttttggaagtggata
acccctaagacattgggcttggtcacacaaacttcagtatatcattggtctattgatggt
gattctgaaccagtgaaagtgtttgagagaacagccaatctggctaacaatcagattata
aactataggtgtgatccttctgaaaagtggttggttttgattgggattgcacctggttca
cctgagaggccacaacttgtgaaggggaatatgcaactcttctctgtggatcagcagaga
agtcaagctcttgaagcacatgctgcagcatttgctcaatttaaagttcctggaaatgag
aacccttcgacgcttatatcctttgccacgaagacacttaacgctggacaaatcacttcc
aagttacatgtcattgaacttggtgcccagccaggaaaaccatcatttacaaagaagcaa
gctgatctcttttttccacctgattttgctgatgactttcctgtggcaatgcagatatca
cacaaatatagtttgatctatgtgatcaccaagctggggctgttatttgtatatgactta
gagacagctgctgctgtatatagaaataggatcagcccagatcctatatttttgactgca
gaggcttcttcagtgggaggattttatgctataaacaggagaggtcaggtgttactggct
actgtcaatgaacaaacaatcatctcctttgtcagtggccagttgaacaatttagagctt
gctgtcaatcttgctaaaagaggaaatcttcctggtgctgaaaatctggttgtccagcgt
ttccaagaactttttgctcaaacaaagtacaaagaagctgctgaattggctgctgagtct
cctcaaggaatcctccgcacaccagatactgttgcaaaatttcagagtgtaccagtgcaa
actggtcaaacaccacctctactgcagtattttggaactttattaacgagaggaaagctg
aatgcatttgagtcattggaactgtctcgtttagttgttaaccagaataagaagaacctc
ttggagaactggttgggtgatgacaagttggaatgcagtgaggaactaggggatcttgtg
aagactgtggacaatgacctggccttgaagatctatataaaagccagagcaacacctaag
gtagttgctgcctttgctgagcggagggaatttgacaagatccttatatattcaaagcag
gttgggtacacgccagactacttattcctgttgcaaacaattctccgaacagacccccag
ggagcagttaactttgcattgatgatgtcacaaatggaaggaggttgccctgttgactac
aatacaataactgatctttttcttcagaggaatttgattcgtgaggctactgctttcctg
ttggatgttttgaagccaaatctgcccgagcatgctttcctccagacaaaggtcctagaa
atcaatctggtgacttttccaaatgtagctgatgccatattggctaatggaatgtttagt
cattatgatagacctcgaattgcccaactttgtgagaaggctgggctttacgtgcgagct
ttgcaggtaagattacttttagcaactatatttcttttccaattctataatgcctttagt
ctttatggacttatgctaggcttattgcctttttctacctatttgcagcattatacagag
ctaccagatattaaacgagtcattgtgaacacacatgctattgaaccacagtcacttgta
gagtttttcggtactttgtctcgtgagtgggctttggagtgtatgaaggaccttttgctt
gtcaatctcagaggcaaccttcagattattgtgcaggttgcaaaggaatattgtgaacag
ttgggggttgatgcgtgcattaaactttttgaacaatttaagtcatatgagggcttgtac
tttttcctggggtcatatttgagttcgagtgaggatcctgacattcacttcaagtacatt
gagtctgctgctaaaacaggacagattaaggaggttgaacgtgtaacaagagaatccaac
ttctatgatgcagagaaaaccaagaactttttaatggaagctaagcttccagatgcacgt
cctttaattaatgtttgtgaccggtttggatttgttccagatctcacacattacctttac
acaaataacatgctccgctacattgaaggctatgttcagaaggtgaaccctgggaatgct
cctctggttgtgggccagctgttggatgatgagtgtcctgaagatttcattaaaggtttg
attctctcagtccgttctttgcttcctgtggagcctctggtggatgaatgtgaaaagaga
aatcgattgcggttgcttactcaatttttggagcatctggtgagtgagggaagtcaggat
gtacatgtacataatgctctcggtaaaattattatcgatagcaacaataatccagaacac
tttcttaccaccaatccatactatgattctcgtgttgtgggtaaatattgtgaaaaacgt
gatcccactttagctgttgtggcctatcgacgtggacagtgtgatgatgagcttattaat
gttacaaacaaaaactctttgttcaaattgcaagcaagatacgtggttgagaggatggat
ggtgatctttgggagaaggttcttaaccctgaaaatgaatatagaaggcagctcattgat
caagttgtatcaacagccttgccagaaagcaagagtccggagcaagtttcagccgctgtt
aaggcttttatgacagcagatctgcctcatgagttgattgaacttcttgaaaagattgtc
cttcaaaactctgcatttagtggaaactttaatcttcaaaatctgcttatattgacggcc
atcaaggcagatccatccagagttatggactacatcaacagactagataattttgatgga
cctgcagtcggtgaagtggctgtggaggcacagctgtatgaagaggcatttgcaattttc
aagaagttcaacttgaatgttcaagctgtcaatgtcttgttggataacattcagagtatt
gaaagagctgtagagtttgcattccgggttgaagaagatgcagtttggagccaggtggca
aaggctcaactgagggaaggactggtgagcgatgctattgagtcctttatccgtgcagat
gatgccactcaatttctggaagtcattcgtgctgctgaggatgcaaatgtgtatcatgac
ttagttagataccttttgatggttagggagaaggccaaagagcccaaggtggacagcgag
ctgatatatgcctatgctaaaattgatcggttggctgagattgaagagtttattctcatg
ccaaatgtggctaatcttcaaaatgttggcgatcgcctgtatgatgaagccttatatgag
gctgctaaaattatatttgccttcatatctaactgggctaagctggctatcactcttgta
aaactgaaacagttccaaggagctgttgatgcagcaagaaaagcaaacagtgcaaagaca
tggaaggaagtgtgctttgcttgtgttgacgctgaagaattccgcttagcacaaatatgt
ggtcttaacattattatccaggtggatgatctggaggaggtcagtgaatattatcagaat
agaggatgcttcaatgaattaatctctctaatggagagtggactggggcttgaacgtgct
catatgggtatcttcactgagttgggagttttatatgctagataccgccatgagaagctt
atggagcatatcaaactgttctcaacccggctgaatattcccaagcttatacgagcttgt
gatgaacagcagcattggaaggaacttacctatttgtatatccagtacgatgaatttgat
aatgctgcaacaaccatcatgaatcattctcctgaagcatgggatcacatgcaatttaaa
gatgttgcagtcaaagttgctaatgtggaattatattacaaggccgtgcatttttacttg
caagagcatcctgatcttatcaatgatcttctcaatgtgcttgcacttcgtgtagaccac
acacgagttgttgatattatgaggaaggctggtcacttgctgcttgtgaagccatacatg
attgcagttcagagcaacaacgtgtctgctgtgaatgaggccttgaatggaatttatgtt
gaagaggaagactatgatagattgcgtgaatcaattgatttgcacgataattttgatcaa
ataggccttgcacagaagattgagaagcatgagttacttgaaatgagacgtgttgcagcc
tacatctacaaaaaagctggaagatggaagcaatccattgccttgtcaaagaaagacaat
ctctacaaggatgcaatggagacagcatcgcaatctggtgaccgtgaacttgccgaggag
ttgcttgtttacttcattgaacagggaaagaaggaatgctttgcctcatgcctctttgtt
tgttatgacttaattcgggcagacgttgctcttgaacttgcctggatcaacaacatgatc
gactttgctttcccatacctgttgcagtttatccgagaatatacaggaaaggttgatgaa
cttgtgaaggacaagattgaggctctcaaagaggtcaaggctaaagagcaggaagagaag
gacgttattgctcagcagaacatgtatgctcagttgctgcctcttgctttgcctgcaccg
cctatgccgggtatgggaggaggaccaggaatgccaggctttgcacctgcaccaccacca
atgggcggattggggatgcctccaatgccaccttttggcatgccaccgatgggtagcagc
tattaa
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