KEGG   Benincasa hispida (wax gourd): 120076611
Entry
120076611         CDS       T07258                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
bhj  Benincasa hispida (wax gourd)
Pathway
bhj03030  DNA replication
bhj03410  Base excision repair
bhj03420  Nucleotide excision repair
bhj03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bhj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    120076611
   03410 Base excision repair
    120076611
   03420 Nucleotide excision repair
    120076611
   03430 Mismatch repair
    120076611
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bhj03032]
    120076611
   03036 Chromosome and associated proteins [BR:bhj03036]
    120076611
   03400 DNA repair and recombination proteins [BR:bhj03400]
    120076611
DNA replication proteins [BR:bhj03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    120076611
  DNA Replication Termination Factors
   ELG1-RFC complex
    120076611
Chromosome and associated proteins [BR:bhj03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    120076611
DNA repair and recombination proteins [BR:bhj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     120076611
  Check point factors
   HRAD17(Rad24)-RFC complex
    120076611
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 AAA_assoc_2 RCF1-5-like_lid AAA_22 AAA_16 AAA_11 AAA_5 ATPase_2 AAA_14 AAA_24 DUF815 AAA_7 RuvB_N AAA_30 nSTAND3 bpMoxR ResIII AAA_19 DNAX_ATPase_lid AAA_3 AAA_18 SLFN-g3_helicase TniB AAA_28 AAA_2 Mg_chelatase AAA_25 TIP49 ABC_tran RNA_helicase
Other DBs
NCBI-GeneID: 120076611
NCBI-ProteinID: XP_038886416
LinkDB
Position
4:complement(47588459..47594555)
AA seq 363 aa
MSEVIAVMDIDDDNGNNEAEKPVKGKNVASPAAAPDGKAIPWVEKFRPKSLADVAAHRDI
VDTIDKLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGTNYQNMILELNASDDRGIDVV
RQQIQDFASTQSFSFGAKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV
NKIIPALQSRCTRFRFAPLDNFHVTERLKYVIEAERLDVTESGLAALVRLCSGDMRKALN
ILQSTHMASQHITEEAVYLCTGNPMPKDIEQISFWLLNEPFSDSFKRISEIKTRKGLALV
DIVREVTLFVFKLKMPSDIRVRLINDLADIEYRMSFGCNDKLQLGSLISSFTRARSALVA
AAQ
NT seq 1092 nt   +upstreamnt  +downstreamnt
atgtcggaagtaattgccgtgatggatattgacgacgataatggcaacaacgaagctgaa
aagccagtcaagggcaaaaacgttgccagtcctgccgccgcacccgacggcaaagccata
ccctgggttgagaagtttcggcctaagtctctcgctgatgttgctgctcaccgcgacatt
gttgacaccatcgacaagcttaccagtgagaataggctgccacatctcctgttgtacggc
cctcctggcactggcaagacatcaactattctagcggttgctcgcaagctttatggaaca
aactaccaaaacatgatactggagctgaacgcatcagatgatagagggattgatgttgtc
agacagcagattcaggattttgcaagtacccaaagcttttcatttggggcaaaggcgtct
gtaaaattggtactattggacgaggcagatgccatgactaaagatgcacagtttgcttta
cgtagagtaattgagaaatacacgaaaaatacaaggtttgctcttatctgtaatcacgtc
aataagattattccagcattacaatcaaggtgtacccgctttcgatttgctcctcttgat
aactttcatgtcactgaacgactcaaatatgttattgaggctgagaggttggacgtcacc
gagagtggcttagcagcccttgttcgactttgcagtggtgatatgagaaaggccttaaat
attctacagtcaacgcatatggcttctcaacatattactgaagaagctgtatacctttgc
acagggaatccaatgccaaaagacatagagcaaatatcattttggctgctgaatgagcca
ttttctgacagttttaagcgaatatctgaaataaagaccagaaagggattggctttggtt
gatatagtgagagaagtcactctgtttgtttttaagttaaagatgccatcggatatcaga
gttcggttgattaatgatctggctgacatagagtaccggatgagtttcggatgcaatgac
aagctacaactcggatcgctcatctcatcttttacacgagctagatctgcgcttgtcgct
gctgcacagtag

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