Benincasa hispida (wax gourd): 120076644
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Entry
120076644 CDS
T07258
Name
(RefSeq) small RNA degrading nuclease 5
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120076644
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bhj03009
]
120076644
Ribosome biogenesis [BR:
bhj03009
]
Eukaryotic type
Pre-60S particles
RNases
120076644
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
Phosphodiest
DEDDh_C
Motif
Other DBs
NCBI-GeneID:
120076644
NCBI-ProteinID:
XP_038886453
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All DBs
Position
4:complement(57948359..57957527)
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AA seq
572 aa
AA seq
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MPSSSVSALDCVDEGKSNAGKTQEKSSFFDIYGTDAKAEVLFKTPESNSTLSLQDVQGLV
TWVLAEGFMPQWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGSPRAVLAL
SCISDRMQTIDALLTCKVKRKRDENSVDIKNKLTSEPEISGLEKEAPISIKLPKELPFPI
TYYTLTAKALEDNGYPFNQPGFIQTLPAPVGSSPNEMLALDCEMCVTCEGFELTRITLVD
IEGRVVLDKLVKPSNAIVDYNTRFSGITCEMLSEVTTSLKDVQRDFLNLVHKETVLVGHS
LENDLMALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSKEIQQSGNGHDSIEDAR
ATMELALLKIKHGPDFGSPPSLIRKKLLNILGESGKTSSFIDNISTVKRYSSESTHAFPV
TSDDEALSRAKKEAMNERVHFIWTQFSELNSYHKKQADDEERLNVKLAELLSLLTCDTKT
VNKKRNSPKISAELREILARMDSRINDLYTSLPTNAMLIICTGHGDIALVQRLRKMLQEQ
SETSICREKIVKILEELHAQAEVALCFVCIKH
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgccatcttccagtgtttcagctttggattgcgtagacgagggcaagtcgaacgccggt
aaaacgcaggagaagtccagcttcttcgatatatatggaaccgatgccaaagctgaggtt
cttttcaaaactccagaatctaattcaactttaagtctgcaagatgttcaaggacttgta
acttgggtgcttgctgaaggcttcatgccgcagtgggtttttatcaagaataaaccccta
atcccaaaagtggttatggtttatctccctggcctggatgctgctctgtacatgtcacag
tccaagatacttcctacatttaaaagattctgcggcagtccaagggcagttctagctctt
agctgtatatcagatagaatgcaaacaattgatgcacttttgacgtgtaaggtaaagaga
aagagggatgaaaacagtgtagacataaagaataaattgacttcggaaccagaaatatct
ggccttgaaaaagaagcaccaatatctatcaagctcccaaaggagttacctttccctata
acatattatacgctaactgccaaagcactggaagacaatggttatcctttcaatcaacca
ggttttatccaaacacttcctgctcccgtgggatcttcacccaatgaaatgttggcactc
gactgtgaaatgtgtgtgacctgtgaagggtttgagctcacaagaataaccctggtggat
atagaaggacgggttgtccttgacaaattggtaaaaccgtcaaatgcaattgttgattac
aatacaaggtttagtggaattacgtgtgagatgttaagtgaggtgaccactagtctgaaa
gatgttcagagagattttttaaatctggttcacaaggagactgttttagttggccattcg
ctggaaaatgacctgatggcattgaagatctctcatgatctggtggttgatactgcagta
ctatataagcatcctcgtggtggctctcataaatctgcccttcggattctggctaaaaga
ttcctttccaaggagattcaacaatcgggaaatggccatgatagtattgaagatgcaaga
gctactatggaacttgcacttcttaaaattaaacatggaccagacttcggttcacctccg
tcattaatccgaaagaaactacttaatatacttggtgagagtggaaagacatcttctttc
attgataatatttcaaccgtgaaaagatattcctctgaatcaacacatgcatttcctgta
acttctgatgatgaagctctctcaagggcaaaaaaggaggcgatgaatgaaagagttcac
ttcatctggacacagttttcagaattgaattcttaccataagaagcaagcagatgatgaa
gaaagattaaatgtcaagcttgcagagttgctgtcgttacttacatgtgatacaaaaact
gtcaacaagaaaaggaacagccccaagatatcggctgaactgcgggaaattttggctcgc
atggattctagaatcaatgacctctatacctcgttacctactaatgctatgcttatcatt
tgcactggtcacggtgacatagcacttgtacagagattgagaaaaatgctacaagagcag
agtgaaacaagcatatgccgtgaaaagattgttaagatcttggaagagctccatgcccaa
gctgaagtagctttgtgttttgtatgtataaaacattga
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