Benincasa hispida (wax gourd): 120077571
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Entry
120077571 CDS
T07258
Name
(RefSeq) protein argonaute 16-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
bhj
Benincasa hispida (wax gourd)
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhj03019
]
120077571
03036 Chromosome and associated proteins [BR:
bhj03036
]
120077571
Messenger RNA biogenesis [BR:
bhj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
120077571
Chromosome and associated proteins [BR:
bhj03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
120077571
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
120077571
microRNA pathway
RISC loading complex
120077571
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
120077571
NCBI-ProteinID:
XP_038887435
LinkDB
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Position
5:63850011..63856543
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AA seq
905 aa
AA seq
DB search
MVNITNTEGKTNEASPLPLVPSIPPDMKPEKAMSPTYTIMSRCGVGSKGRQIPLLTNHFT
VSVSAPDLIFYQYTVSICYEDSRPVEGKEIGRKLMDKVYQTYSAELANKRFAYDGEKCLY
TIGPLPQNKLVFTVVLEGSCAKLETGTSGGSGSPNGTGKRLKRSFQSKTFKVELSFATKI
PIKSIFTALKGSEVDNGSTQDALRVFDIILRQQAAKRGCLLVRQSFFHDDSRNFADVGGG
VTGVRGFHSSFRLAQDGLSLNMDVSTTMILKPGPVIDFLIANQNVREPRYIDWTKAKKML
KNLRVKARHRNMEFKIIGLSEKPCNQQFFSMKLKNNGSTDGQMVDITVYEYFVRHCGIEL
TYSAYLPCLDVGKPKRPTYMPLELCSLVSLQRYTKALSSMQRASLVEKSRQKPQEKIKII
TDALKNYGYDEDPVLAQCGVKIDRQLTQVEGRVLESPKLKVGKSDDCIPRNGRWNFNNKT
LLNPTRIDRWIVVNFSARCDTSYISRELINCGRNKGIHIERPITLIEEDQHSRRASPVDR
VENMFEQMMAKMSDAPTFILCVLPEKKNSNIYGPWKKKCLCDFGIVTQCISPTKINDQYI
TNVLLKINSKLGGINSLLAIEHASCVPMIKDTPTLILGMDVSHGSPGRSDVPSIAAVVGS
RSWPLISRYRAAVRTQSPKVEMIDALFKPLEDGKDDGIIRELLLDFYSTSKGRKPTQILV
FRDGVSESQFNQVLNVELDQIVKAYQHLGEVNVPKFTVIVAQKNHHTKFFQPGAPENVPP
GTVVDTKVVHPKNYDFYMCAHAGMIGTSRPAHYHVLLDEIGFSPDDLQNLIHSLSYVYQR
STTALSIAAPICYAHLAASQMSQFIKFEELSETSSERGTITSSGSLSIPELPRLHQDVDG
SMFFC
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atggttaacattactaataccgaagggaaaacaaatgaagcctcccctttgcccctggtg
ccatctatacctcctgatatgaagccagaaaaagcgatgtctcctacatatacgatcatg
agtagatgcggtgtaggaagcaaagggagacaaattcctttgctcactaaccacttcaca
gtatctgtcagtgctccagatttgatcttctatcaatacactgtttcaatatgctatgaa
gatagcaggcctgttgaagggaaggaaattgggcggaaactgatggataaagtgtatcaa
acttattctgctgaacttgctaataaaaggtttgcatacgatggagaaaaatgtctttac
accattggtcccttgccacaaaacaagcttgtgttcactgtggtgctagagggatcatgt
gcaaaactagaaacaggtacctctgggggcagtgggagcccaaatgggactggaaagaga
ttaaagcgtagttttcagtcgaagacttttaaggttgagctaagttttgcaacaaaaatt
ccaattaaatccatttttactgctctcaagggatcagaagtagataatggcagcactcag
gatgcattgagagtgtttgacattatcctgaggcagcaagcagcaaagcggggatgtctt
ctggtacggcagtcgttctttcatgatgactcgaggaactttgctgatgttggcggaggg
gtaacaggagtacggggattccattctagcttccggttggcacaggatggattatcattg
aatatggatgtttctaccacaatgatcctgaagcctggaccagtgattgatttcctaata
gccaatcagaatgtacgggaaccacgttatattgattggactaaggcaaagaaaatgtta
aagaatttgagggtcaaggcaagacatcggaacatggaatttaaaatcattggtttaagt
gaaaagccttgcaaccaacaatttttttccatgaaactgaagaataatgggagcactgat
gggcagatggttgatattactgtttatgaatattttgtcagacattgtggcattgaattg
acttattctgcttatttgccatgtctagatgttgggaaacctaaacggccaacttatatg
cctttagagttgtgctcacttgtttcacttcaacgctacacaaaagctctgtcttctatg
caaagagcatctttggtagaaaaatcaaggcagaagcctcaagaaaaaataaaaattatc
accgatgctttgaaaaattatggatatgatgaggatccggtgctagcacagtgtggagtg
aaaatagatagacaactgacacaggttgagggtcgtgtacttgaatctccaaagttgaag
gttggtaaaagtgatgattgtattccacggaatggacggtggaactttaataacaagaca
cttctgaatcccactcgcattgaccgttggattgttgtcaatttctcagcacgctgtgat
actagctacatatcacgcgaacttataaattgtggaagaaataaagggattcatattgaa
agaccaattaccttgattgaggaagaccagcattctagaagagccagccctgttgacagg
gttgaaaatatgttcgaacagatgatggcaaagatgtcagatgcaccgacttttattctt
tgtgtcctcccagaaaagaaaaattcgaatatatatggaccttggaagaaaaaatgttta
tgcgactttgggattgttacacagtgcatttcccccactaaaattaatgatcagtacatt
actaatgtacttcttaagattaactccaagctgggaggtataaactcattgttggctatc
gagcatgcatcttgtgttccgatgataaaagatactccaacgttgatcttgggaatggat
gtgtctcatgggtctcctggacgatcagacgttccatccattgctgcagttgttggatcc
agatcctggcctttgatatcaaggtatagagcagctgtacggacccagtcgcctaaggtg
gaaatgattgatgctctatttaagcctctggaggatggcaaggatgatggtatcattagg
gaattgcttttagatttctatagcactagcaagggccgcaaaccaactcagatccttgtc
tttagagacggagttagtgaatctcaatttaatcaagtgttgaacgttgagttggatcaa
atagtcaaggcttaccaacatcttggagaggttaacgttccaaagttcacagttattgta
gcacaaaaaaatcaccatacaaaattttttcaacctggtgcccctgaaaatgttccacct
ggaacggttgttgacacaaaagttgtacatccaaaaaattatgacttctacatgtgtgct
catgcgggaatgattggcacgtcaaggccggcacactaccatgtcctgctcgatgaaata
ggtttttctcctgatgatcttcagaaccttattcattcgctatcatatgtgtatcaaagg
agcacaactgcactttcaattgccgcaccaatatgttatgcacatcttgctgcatcacag
atgagtcagtttattaagttcgaggaactgtctgaaacctcctctgaacggggaaccatt
acttcatcgggaagtctttcgattccagaacttccacggttgcaccaagatgttgatggt
tctatgtttttctgctga
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