Benincasa hispida (wax gourd): 120077637
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Entry
120077637 CDS
T07258
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
bhj
Benincasa hispida (wax gourd)
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bhj03041
]
120077637
Spliceosome [BR:
bhj03041
]
Common components
Common spliceosomal components
General mRNP proteins
120077637
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_MUD2_C
RRM_10
RRM_7
RRM_ACIN1
Motif
Other DBs
NCBI-GeneID:
120077637
NCBI-ProteinID:
XP_038887514
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All DBs
Position
5
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AA seq
684 aa
AA seq
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MDFDEYDYLEKTVENPEGQKVKETANGGDADMKSGDKHRSRSSKYKSDSKDDGEHRSKRS
KSEDESRDQDRHRDRHRSRFGERDRDRHRSSKENRGKEDREGNHEERSSRDRDVDRDKER
SHDRDRRGRDGERNRERERSRRSRSRSERHRSDRDEGIRERSRDNELRERERERESRERG
RDGRRYKDKKEEAAEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRLIMDR
NSRRSKGVGLTTSSSLHPKEFSIKKDVNLVKDKVELDSPRGEKVDGRQSLKDSKKHSRLL
KPFPEHFIRKKTSFFNSWTTLANSDLLEECCVKVQIPDFFPNRYVEFVDAMSVPMAIALS
GQLLLSQPVMVKPSEAEKNQVQSTAAAGGPGGVMGPYSGGARRLYVGNLHPNITEDNLRQ
VFGAFGTVELVQMPLDESGHCKGFGFIQFSRLEDARNALSLNGQLEIAGRTIKVSTVTDQ
PGLQDIGANTGDLDDEDGGGLSLNASSRASLMQKLDRTRAASSIAGSLGTHVVNNTGAAM
PMAPILGGATIPSLAVGTSLAAFPAFPGLGAGVHVPAVAASLLGVGTPSECLLLKNMFDP
TAESEPTFDLDIRDDVEEECSRFGKLKHIYVDKNSAGFVYLRFEKSESAMEAQRALNGRW
FAGKMIGATFMDIPSYEVKFPDSR
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggattttgacgagtatgattatttagagaaaacagttgaaaatcccgagggacagaaa
gtgaaggaaactgccaatggcggtgatgcagacatgaagtctggagataaacatcgtagt
cgaagttcaaagtataagagtgacagtaaagatgacggggaacataggtcaaaacgttca
aaatcagaagatgagtcacgtgatcaagatcgacatagggataggcatcggtctaggttc
ggagagagagaccgtgataggcatagaagcagtaaggaaaataggggaaaagaggacaga
gaagggaatcatgaagagagaagcagtagagacagggatgtggacagagataaagaacgt
tctcacgatcgtgatagacgaggtagagatggcgaaaggaacagggaaagagaacgatca
cgtcgaagtagaagtcgttcagaaagacatcgtagtgatcgggatgaaggcataagagag
aggagccgagataatgaactcagagaaagagaaagagagagagagtctagagagcgaggc
agagatggcagaagatataaagataaaaaggaagaagcagctgaaccagaagctgatcct
gaaagggatcagaggactgtatttgcctatcagataagtttaaaggcaactgaaagagat
gtgtacgaattcttctccagggctggtaaggtgcgagatgtacgcctcataatggatcgt
aattcacgacgttctaaaggcgtcgggttgacaactagttcctctttgcacccgaaggag
ttctcaatcaagaaggacgtgaacttggtaaaggataaggtggagttagattcaccacgg
ggagagaaagtggacggccgtcagtctttaaaggactccaagaagcattctcgtctgctg
aagccattccctgaacattttattagaaaaaagacatccttcttcaactcttggacaaca
ttagccaactcagatttgctcgaggaatgttgtgtcaaggttcaaatccctgattttttc
cccaataggtatgttgaatttgtggatgcaatgtctgtgcccatggctatagcactttca
ggccagctcctgcttagtcaacctgtgatggtaaagccatctgaagctgagaaaaaccag
gttcaatcaactgctgctgctggtggaccgggtggagtaatgggcccctactctggtggt
gccagaaggttatatgttggcaatctacaccccaacataactgaagataaccttcgtcag
gtttttggagcttttggcactgtggaactggttcagatgccccttgatgaatctggccat
tgcaaaggttttggttttattcagttctcacgtcttgaagatgctagaaatgcactgagt
ttgaatggacaacttgagattgctggtcgaacaataaaggtgtctacagtcacagatcag
cctggtttgcaagatattggagcaaatacaggagaccttgatgatgaggatggcggtggc
ctgtccttaaatgctagttctcgagcatctctgatgcagaagctggaccgtactcgtgcg
gcatctagcattgctggttctttaggtacacatgtcgtaaataacacaggcgctgctatg
ccgatggcacctatccttggaggtgcaactatcccttcccttgctgtcggtacttctttg
gccgcctttcctgcttttcctggacttggtgcaggcgttcatgttcccgctgttgctgcc
agtttacttggtgttggtactccaagtgaatgcttactgttgaagaatatgtttgatcct
acagctgagtcggaaccaactttcgatctagatatcagagacgatgttgaagaggagtgc
tctaggttcggaaaattgaaacatatatatgttgacaagaatagcgctggttttgtatat
ttgagatttgaaaaatcagagtctgcaatggaagcccaacgtgcccttaatggaagatgg
tttgctgggaaaatgatcggtgcaactttcatggacatcccgagctatgaagtgaaattt
ccagacagcagatag
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