Benincasa hispida (wax gourd): 120077648
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Entry
120077648 CDS
T07258
Name
(RefSeq) probable E3 ubiquitin-protein ligase XERICO isoform X1
KO
K16285
RING/U-box domain-containing protein [EC:
2.3.2.27
]
Organism
bhj
Benincasa hispida (wax gourd)
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bhj04121
]
120077648
Enzymes [BR:
bhj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120077648
Ubiquitin system [BR:
bhj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120077648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-RING_5
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_2
zf_RING_Vps8
zf-C3HC4_3
zf-ANAPC11
zf-RING_16
zf-RING_Vps41
Prok-RING_4
zf_RING_Vps8_fungal
Prok-RING_1
PHD_NSD
Rad50_zn_hook
zf-HC5HC2H
Auto_anti-p27
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
120077648
NCBI-ProteinID:
XP_038887530
LinkDB
All DBs
Position
5:complement(51336181..51337857)
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AA seq
219 aa
AA seq
DB search
MAERTLNWPNQDELISNLYHLNNSTTFLEFSPFFDTTLSVSPLFSRIEVVFPAIPTEFVK
FVLTTMGLSSLPAPSEGVLNVILVNTALSISMFKCIVRLILHMIGIRLSWPSSLVSSTDS
FESSSELGDSNFGSSWSYLEMFRNRYLSIRFDKIQGSERREHDCSVCLTQFEPESEINIL
SCGHLFHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFW
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaaggacactgaattggccgaatcaagatgagctgatcagcaatctttaccat
ctaaacaattccactacttttcttgagttttccccctttttcgatactactctctctgtt
tctcctctgttctcgaggatcgaagttgtttttccggctataccgaccgagttcgtgaag
ttcgttttaactacaatgggtctctccagtcttccagctccatctgaaggagttctgaat
gtgattcttgtaaacactgcactgtccatttccatgttcaaatgcattgttcgtttgatc
cttcacatgataggaatccgtctctcatggccatcatccttagtctcatcaacagattcc
tttgaaagttcctcagagttgggagattccaattttggctcctcttggagttacctcgag
atgtttcggaaccgatatctgagtattagatttgataaaatacagggttcagaacgtcgt
gaacatgactgctcggtctgcctaactcaatttgaacctgaatctgagataaatatctta
tcttgtggtcatctttttcacacagaatgcttggagaagtggctggactactggaacatc
acatgccctctttgcagaactcctctaatgtctgaagaagagaaatcgtgcttttggtga
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integrated database retrieval system
