Benincasa hispida (wax gourd): 120077939
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Entry
120077939 CDS
T07258
Name
(RefSeq) pentatricopeptide repeat-containing protein At2g15820, chloroplastic
KO
K27936
pentatricopeptide repeat-containing protein, chloroplastic
Organism
bhj
Benincasa hispida (wax gourd)
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bhj03041
]
120077939
Spliceosome [BR:
bhj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
120077939
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Gene cluster
GFIT
Motif
Pfam:
LAGLIDADG_2
PPR_2
PPR
PPR_1
PPR_long
ARM_TT21_N
TPR_19
L1R_F9L
Motif
Other DBs
NCBI-GeneID:
120077939
NCBI-ProteinID:
XP_038887990
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Position
5:complement(1759175..1764296)
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AA seq
788 aa
AA seq
DB search
MSIHTSAFSSVTLLRSPSLSLSPYHHYFRCPNHIVRTIFIPIYSVKGQQQLPRIPSFASS
SSVEQLVYDRDSLFESEEHLSSPYSNGADGFASADLKHLEMPALEVKELDELPDQWRRSK
LAWLCKELPAQKPGTLIRLLNAQRKWMRQDDATYLTVHCLRIRENETAFRVYKWMMQQRW
YRFDYALATKLADYMGKERKFSKCREVFDDIINQGCVPSESTFHILIVAYLSAPVQGCIE
EASTIYNRMIQLGGYQPRLSLHNSLFRALTSKPGDLSKHHLKQAEFIYHNLVTSGLEVHK
DICGGLIWLHSYQDTIDKERIVSLRKEMQQAGIKEEREVLLSILRASSKMGNVMEAERSW
QKLKDFDGNMPSQAFVYKMEVYAKMGKPMKALEIFREMEQLNSANAAAYRTIIGILCKFQ
DIELAESIMKGFIKSNLKPLMPAYVDLMNMFFNLSLHNKLELIFSQCLEKCKPDRTIYSI
YLDSLVKVGNLDRAEEIFSQMETNGEIGINARSCNIILSGYLLFGNYLKAEKIYDLMCQK
KYDIDPPLMEKLDYVLSLSRKEVKKPVSLKLSKEQREILVGLLLGGVEIESDEERKNHRI
QFEFQQNCNTHSLLRRHIYEQYHEWLHSASKLNDGDIDIPYKFCTVSHSYFGFYADQFWP
QGHPAIPNLIHRWLSPRVLAYWYMYGGCRTSSGDILLKLKGSREGVEKIVKSLREKSMQC
KVKRKGSMYWIGLLGNNATWFWKLVEPFILDYLKDSLEADSPNLGRVLNETENINFDSQS
DSVEEASN
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgtccattcatacctctgcattttcctctgtgacccttctccggtctcccagtctttcc
ctctctccataccatcactactttcgttgtcctaatcacatagtccgtactatctttatc
ccaatatattctgtaaagggacaacaacaacttccgcggattccttcctttgcttccagt
tcttctgttgaacagctggtgtacgaccgagattccctgttcgagtctgaagagcactta
tcttctccatacagtaacggggctgatggttttgcatcggcggatttgaaacatttagaa
atgcctgcgcttgaagtcaaggagctggatgagttgccggatcaatggcgaagatccaaa
ttggcttggctttgtaaggaattgccagcacaaaagccgggaacattgatacggctgctt
aatgctcagaggaaatggatgaggcaggatgatgcaacctatctcaccgtgcattgtttg
cgtattcgcgaaaacgagactgcatttagggtgtacaagtggatgatgcaacaacgttgg
taccgatttgattatgctttagctactaagcttgctgattacatgggcaaggaacgaaag
ttctcaaagtgtcgggaagtatttgatgatatcattaatcagggatgcgtgccaagtgaa
tccacatttcatatattgattgttgcatatcttagtgcacctgttcaaggatgcatagag
gaagcaagtaccatttacaatcgtatgattcagttaggaggttaccaaccacgtcttagc
ttgcacaattctctctttagagctcttacgagcaaaccaggggatttgtcaaagcatcat
cttaaacaggctgagtttatatatcacaatttggtaacaagtggactcgaggtacataaa
gatatatgtggtggtctaatttggctacacagttatcaggatactatagacaaagagagg
atagtgtcactaaggaaagaaatgcaacaagcaggaatcaaggaggaaagagaagtcctt
ttgtccatcttgagagcgagctcaaaaatggggaatgtaatggaagcagaaagatcatgg
caaaaacttaaagattttgatggtaacatgccatctcaggcttttgtttataaaatggaa
gtctatgcaaagatgggtaaaccgatgaaagctttggagatatttagggagatggagcag
ttgaactctgcaaatgctgcagcatatcggacaattattggtattttatgtaaatttcaa
gatatagaacttgcagaatcgatcatgaaaggcttcataaagagtaatctaaaacccctc
atgccagcatatgttgatttgatgaatatgtttttcaatttaagcttacacaataagtta
gagttaatcttctctcagtgccttgagaagtgtaaacctgatcgtactatctatagcata
tatttggactctttggtaaaagttggtaatctcgacagggctgaagaaatatttagtcag
atggaaacaaatggagaaattggtataaatgctcgttcatgcaacatcattttaagtggg
tatcttttatttggaaattatttgaaggctgaaaaaatatatgatttgatgtgtcagaag
aagtatgacattgatcctccattaatggagaaacttgattatgtcctaagcttgagcagg
aaggaggttaagaagccagtaagcttgaagttgagcaaagaacagagggagattttagta
ggcctgttgttaggtggcgtggagatagagtctgatgaagagaggaaaaatcatagaatc
cagtttgaattccagcaaaactgtaatacccactctcttttgaggagacacatatacgag
caatatcacgagtggttgcattctgcttcaaagttgaacgatggtgatatagatatacca
tataaattctgcactgtttcacattcatattttggtttctatgcagatcagttttggcca
caaggccatcctgcaatccctaatctaattcaccggtggctttcacctcgtgttcttgca
tactggtatatgtatggaggctgcaggacatcatcaggggatattttactgaagctaaaa
ggaagtcgagagggtgttgagaagattgttaaatctctgagagagaagtccatgcagtgc
aaagtgaaaaggaagggcagcatgtattggataggtttactaggaaacaacgccacatgg
ttctggaaactagttgaacctttcattctggattacttgaaagatagtctagaggcagac
agtcctaacttggggagggttttaaatgaaactgaaaatatcaactttgatagtcaatct
gattctgttgaggaggcttctaattaa
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