Benincasa hispida (wax gourd): 120077972
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Entry
120077972 CDS
T07258
Name
(RefSeq) transcription initiation factor IIF subunit alpha isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120077972
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhj03021
]
120077972
Transcription machinery [BR:
bhj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
120077972
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
Ribosomal_S27e
Motif
Other DBs
NCBI-GeneID:
120077972
NCBI-ProteinID:
XP_038888042
LinkDB
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Position
5:2044866..2050449
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AA seq
537 aa
AA seq
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MSFDLMLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN
VRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKDGLQGRQLTDALREKYKNRPWLL
EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKM
KNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKEGVGTSGRGRRKPTGDENEGNVSDRG
EEDEEEEAQRKNRLGLNKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
TAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG
EDDDDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGKRK
NGEDVKPSSAPPKKMKTETESKSTDEVSTSKSTASKGAPALVKTEPASHSGPVTEEEIRA
VLRQRTPVTTQDLVAKFKARLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcgatctgatgctgaagccgtcgtgcagtggatgtggatccacgacggagttg
tatggaagcaattgcaagcacatgacgttgtgcttgacctgtggcaaaactatggctgag
aacaagggcaaatgttatgactgtggggctactgtaactcgcttaataagagaatacaat
gttcgagcaagtgcaagtagcgacaagaactacttcattggtaggttcatgagcgggctg
ccgaacttttcgaagaagagaaatgctgagaataaatggtctctttacaaggatggtcta
caagggcgccaacttacagatgcccttcgggaaaaatacaagaatagaccctggctcttg
gaagatgaaacgggccaatttcaattccaaggtcatcttgagggctcacaatcagcaaca
tattacttgcttgtattgcaaggaaaggaatttactgccattcctgcaggttcttggtac
aacttcaacaaagtggcacagtataagcaacttacattggaggaggccgaagaaaaaatg
aagaatcgaaagaagacagcagatggatatgaaagatggatgatgaaagctgcaagtaat
ggtcctgctgcatttggtgaagttgagaagtttgatgacaaagaaggtgttggtactagt
ggtaggggacggagaaaacctactggtgatgagaatgaaggcaatgtctcggatagggga
gaagaagacgaagaagaagaggcacaaagaaagaacagattgggactcaataaaaagggt
ggtggcgatgatgatgatgaggaaggtcctaggggtggtgaccatgacttggatgatgat
gatattgagaaaggagacgattgggagcacgaagagatttttactgatgacgatgaaact
actgctccggatcgtgaagaaagggaggatttagcccccgaagttcctgcacctccagaa
atcaagcaggacgaagacgatgaggatgaagaaaatgaaggggagggggggctgagcaaa
tctgggaaagagttgaagaaactgcttaggcgtactggggggcttaatgattcagatgga
gaggatgatgacgatgatgacgatgtggatgaggacactggtggcactcccgtcttacct
tcgaagcagaaggatacagttaaagaagaagctgcagcaaacagtccctcaaaaccaaca
ccttctggatctgctaaggggaccccttcaactgcaaagacggcaaaggggaaaaggaaa
aatggcgaggatgtgaaaccatccagtgcacctccaaagaaaatgaaaacagagacagaa
tccaagtctacagatgaagtatctacttctaaaagtacagcctcaaaaggtgccccggca
ttggtcaaaactgaaccagcatcgcattctggacctgttactgaggaagaaattagggct
gtcttgcggcaaaggacacctgtaactacacaggatcttgtcgcaaaattcaaagcaaga
ttacgaactccagaggacaagaatgcttttgctgaaatccttaggagaatttcaaggatt
caaaagacaaatgggggaccgagttacgtggtattgagaaaacctgaagactag
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