Benincasa hispida (wax gourd): 120078396
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Entry
120078396 CDS
T07258
Name
(RefSeq) cell differentiation protein rcd1 isoform X1
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120078396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhj03019
]
120078396
Messenger RNA biogenesis [BR:
bhj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
120078396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
120078396
NCBI-ProteinID:
XP_038888594
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All DBs
Position
5:47379404..47383049
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AA seq
326 aa
AA seq
DB search
MANLPDSLFGESSSAEPTTAPEPVISHPPHTDLSNVSVHELILALNHAHTRERALQLLSQ
CRFFVFSLQNRSMCDNLAVLIWHSFGTMFTLLKEIMEVYHLLSKPDLTEKASTRVCHALA
LLQCVASHPETRMPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVI
YFLLKTEIVPYCLRCMDVGKGLSKTVATFIVQKILMNEEGLRYCCIIADRFFAITRALET
MMERLSEEPSQRLLKHIVRCYLKLSESPRACLGLGRLLPRMLNDSAFTDLLRDDPTVMSS
FKQLLRNVHENRLRDNESKQGNPKTG
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggccaatcttcctgactctctgttcggagaatcgtcgtctgcagaaccaaccaccgcg
ccggaacccgtcatttctcatcctcctcatacagacctatccaacgtctctgtccatgaa
ctcattctcgctctcaatcacgcccatactcgtgaacgtgctttgcagcttctttctcag
tgcagatttttcgttttttctcttcagaataggagcatgtgtgacaatttggctgttctg
atatggcattcctttggtactatgtttacccttctgaaggaaataatggaagtttaccat
ttgctgtccaagcctgaccttacagaaaaagcttcaactagggtctgtcatgctcttgct
cttcttcagtgtgtggcttctcacccagaaacaaggatgccatttatgaaagctaagatt
ccactctatttgtacccttttcttaataccaccatcaaggaaaaacctcatgaatatctc
aggctcacaagcttaggagtaattggtgcactagtgaaggttgatgacaaggaagttatt
tacttcctactcaaaactgaaatagttccatactgtctgcgatgcatggatgtgggaaaa
ggcttgtcaaaaactgttgccacgtttattgttcagaaaattctaatgaatgaagaggga
ttgaggtactgctgtatcatagctgatcgatttttcgcaataactcgtgccttggaaaca
atgatggaaagactttccgaagaaccctcgcaacggctgctaaaacatattgttcgctgc
tatcttaagctatctgaaagtccaagggcttgcctgggacttgggagactccttcctcgg
atgctaaatgacagtgcctttaccgacctcctccgtgatgatccgactgtcatgagctcg
ttcaagcagttgcttcgcaatgtacatgagaataggttacgagacaatgaaagcaaacaa
ggcaatccgaaaacaggctga
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