Benincasa hispida (wax gourd): 120078544
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Entry
120078544 CDS
T07258
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj00040
Pentose and glucuronate interconversions
bhj01100
Metabolic pathways
Module
bhj_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120078544
Enzymes [BR:
bhj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
120078544
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Motif
Other DBs
NCBI-GeneID:
120078544
NCBI-ProteinID:
XP_038888748
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Position
5:23750739..23757156
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AA seq
377 aa
AA seq
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FLINHAIKTPLSYNIVSFGAKADGKSDSIQAFQKAWDHACGSIKPASIYVPKGRFYLRSG
KFNGPCKNKAIFIRIDGTLVAPSDFRVIGNSAAWIMFKNVDGVTILGGILDGQGTKLWAC
KTTGNNCPTGASTIEFSYSKNVVISSLTSLKSQMFHIVINHCQNMKMKGLKIFASGDSPN
TDGIHVQLSSDVTILNSKIGTGDDCISIGPGTFNLWIENIICGPGHGISIGSLAKDQQEA
GVQNVTVKNALFSRTQNGVRIKAWARASNGFVKNIIFKNIVMDNVYNPILIDQNYCPRHK
ECPDKASGIKISDVTYQNIHGTSATKVAVKFDCSPTNPCNQIRLEDVKLSYMNQMAQATC
SHAGGIATGLVQPISCF
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
tttctcataaatcatgctattaaaacaccattgtcatataatattgttagttttggagcc
aaggctgatggaaaatcagattcaatacaagcatttcaaaaggcatgggaccatgcatgc
gggtccataaaaccagcctctatttatgtgcctaaaggaagattttatcttcggagtgga
aaattcaatggaccttgcaagaataaagccattttcatacgtattgatggaactctggtg
gctccctctgactttcgagttattggcaactctgcagcttggatcatgtttaagaatgtt
gatggagtaacgatcttaggtggaattcttgatggtcaaggaaccaaattatgggcttgt
aaaactactggcaacaattgcccaactggtgcctcgactattgaattttcctactcaaag
aatgttgtgattagttcattaacatcactcaaaagtcaaatgttccacatagtgatcaat
cattgtcaaaatatgaaaatgaaggggctaaagatcttcgcctcaggtgatagccctaat
actgatggtatacatgtacaactatcatctgatgtgactatactaaactctaaaataggc
acgggagacgactgtatatccatcggtcctggcaccttcaacctatggattgagaatatc
atctgtggacctggtcatggaataagcattggaagtctagcaaaagatcaacaagaggcc
ggggtgcaaaatgttacagtaaaaaatgcattattttcacgcactcaaaacggggtgaga
atcaaggcatgggctagggcaagcaatgggtttgttaagaacattatcttcaaaaatatt
gtaatggataatgtgtacaacccaattcttattgatcaaaattattgtccacgccataaa
gaatgtccagacaaggcttctggaatcaaaattagcgatgtgacatatcaaaacattcat
ggaacatcagccactaaggttgcagtaaagtttgattgcagtcctacaaatccatgcaat
caaataagattggaggatgtcaaacttagttatatgaatcaaatggctcaagctacttgt
agccatgctggagggattgccactggtcttgttcagcctattagttgcttctaa
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