Benincasa hispida (wax gourd): 120078774
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Entry
120078774 CDS
T07258
Name
(RefSeq) RING-H2 finger protein ATL16-like
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
bhj
Benincasa hispida (wax gourd)
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bhj04121
]
120078774
Enzymes [BR:
bhj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120078774
Ubiquitin system [BR:
bhj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120078774
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
zf-RING_16
Prok-RING_4
zf-RING_4
Prok-RING_1
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
120078774
NCBI-ProteinID:
XP_038889009
LinkDB
All DBs
Position
5:4465032..4466534
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AA seq
350 aa
AA seq
DB search
MEPTQKSLHSFEFQAFLPIKNQQIPSYQSPFSTVSDSTSPVLAVAVLSVMGTAFLLLGYY
IFISKCCSNWHQFSLLRRFSSFHTPQQDEDPFIALSPTTMWNRGLEESMIRQIPAFQFER
DGEGSGIYSCVVCLSKFRENEMLRVLPKCSHTFHLDCIDIWLQSNSNCPLCRTSISGITK
PPIDQIVAPSSSPQNSQLLSNSIMGSDEDFVVIELGREDEEVFSPGQHEGNASREVLVQQ
PRYHSPKKLENKVGKPKTRKCHHVSIMGDEGINVRANDDQFFTQPIRRSFSMDSAADQQL
YLTVQMIIHQDRQITESSSSGSSAEIDSRNRRSFFPFRSGRGLQKCNSST
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggaaccaactcagaaaagcctccatagctttgagtttcaagcttttctacccatcaaa
aaccaacagattccatcttaccagtctcctttttctactgtttctgattctacttctcct
gttttagctgttgcagttctaagtgtgatgggcacagctttcttgcttttgggttactat
attttcatcagcaaatgctgctctaactggcaccagtttagtttgctgaggaggttttca
agttttcataccccccaacaagatgaagatcctttcatagctctctctccaacaacaatg
tggaatcgcggtctcgaagagtcgatgattcgccaaatcccggcttttcaattcgaaaga
gacggtgaaggtagcggtatttatagctgtgttgtttgtctaagcaagtttcgagagaat
gaaatgctaagagttttaccaaaatgcagccacacatttcatttggactgcattgatatc
tggctgcaaagcaactctaattgccctctttgtagaacaagcatttcaggcataacaaag
cctccaattgatcaaattgtagctccaagttcttctccacaaaactcacagcttctttcc
aacagcataatgggaagtgatgaagattttgtagtcattgaacttggtagggaagatgaa
gaagttttctcaccagggcaacatgagggtaatgcttcaagagaagtactagttcagcag
cccagataccattctccgaaaaaactcgaaaacaaggtcggcaaaccaaaaactcgaaag
tgtcaccatgtttcgatcatgggagacgagggaatcaatgttagagcaaatgatgatcaa
ttctttactcaacccatcagaagatccttttccatggattctgcagctgatcagcagctt
tacttaaccgttcaaatgataatacatcaagataggcaaatcactgagtccagtagtagt
ggtagtagtgcagaaattgacagcagaaaccgaagatctttctttccgtttcgatcggga
cgaggattgcaaaaatgcaattcttccacttga
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