Benincasa hispida (wax gourd): 120079016
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Entry
120079016 CDS
T07258
Name
(RefSeq) paired amphipathic helix protein Sin3-like 4 isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
bhj
Benincasa hispida (wax gourd)
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bhj03036
]
120079016
Chromosome and associated proteins [BR:
bhj03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
120079016
REST complex
120079016
Heterochromatin formation proteins
Other heterochromatin formation proteins
120079016
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
PAH_ZNF598
At4g15545_C
Motif
Other DBs
NCBI-GeneID:
120079016
NCBI-ProteinID:
XP_038889114
LinkDB
All DBs
Position
6:18853646..18866036
Genome browser
AA seq
1390 aa
AA seq
DB search
MKRSREDVNMESQLQRPVFPSRGESTVQSQMVGGGSLQKLTTNDALEYLKNVKDIFRDKK
EKYEDFLEVMKEFKAQRIDTVGVIARVKQLFKGHRDLILGFNTFLPKGYAITCPLEDETP
PQKKKPVQFEEAINFVGKIKTRFEGDNHVYKSFLEILNLYRKENKSISEVYREVSALLHD
HPDLLREFVHFLPDASATTSNNHMSSMRNSVLRDRNSSIPPIQQKERTMAPHADHDIVHH
PDCDNARVTINGDKEKCQHSEKEKDMRDNTDSMEQYRDADKKFNEHDNGKDISMQSFSQK
RKPTIRVEDTTSVKLHLGGEGMSFIEKVRQKLPNVDVYQEFVKCLDIFDKEIITRSELHS
LVRDLLGRYPDLMDAFGEFMTLCDRTDGLLADIMSKKSLWNEGSLPRSAKVEEKDRNRDH
EREDGVKDRDHGNRERDNRLEKSVAFGYNDVGSQKMSLFSSKDKYFAKPINELDLSNCER
CTPSYRLLPKNYPIPFASQRTEIGAQVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCE
DDRFELDMLLESVNVTSKRVEDLLEKINLSDSPVHIEDHLTALNLRCIERLYGDHGLDVM
DVLRKNAPLSLPVILTRLKQKQEEWARCRSDFNKVWAEIYFKNYQKSLDHRSFYFKQQDT
KSLSTKALLSEIKEINEKKHKEEDVLLTITAENKRPIIPNLEFDYPDQDIHEDLYHLIKY
SCRELCSTDQSDKAMRIWTTFLEPMLGIPSRPQGAEDSKDIIRENNFAIRGTAIGMVEIS
GSSIGGGAESKLPDPPRIEVEGVPPKQSSPCRVWPMNGDSCLEENIFHKANRVDSKVDGL
CKLQFNNKQEHSNERLVKSNVLVSAVLEQGNGKVIVETASGLRSTPSRTWNGSVDKGLEL
VSSSQGGGPSRPLLSNGVMAEGSNAPSFNEKCDGHSKIEREEGELSPTGELEDNFSNYQD
ASLDKAKHSASGRQCFRTHADKISCRNVAGEMHIDADDEGEESARRSSEDSENGSENCDI
SGTESVDGEDSTREGQEDRGHHDRDSKVESDGEAEGMDDAHSAGGDGTVLPFSERFLLNV
KPLAKYVPLALRNEKKNSRIFYGNDSFYVLFRLHRTLYERIRSAKINSSFGERKWRASND
TSPNDLYSRFMSALRSLLDGSSDNMKFEDDCRSIIGTQSYVLFTLDKLIYKLVKQLQTVA
TDEIESKLLQLYAYENSRKRGKDVDTVYHDNARVLLHDDSIYRIECSCSPGHLSIQLMEF
GNDKPEVTAVSLDPNFSGYLHNDFLSILPDEKEQSGIYLHRNKCKLVCSDEISAACQAME
GLKVVNGLECKITCNSSKVSYVLDTEDYLFRTKGRRRSLHRSGSCRHHQSRSSNGSSSRG
QRYQRWLSSS
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggtccagagaagatgttaacatggaatcacagctccagcgtcctgtattcccc
tctaggggagaatcaactgtgcagagccaaatggtaggaggtggcagtttgcagaaacta
acaacgaatgatgccctagaatatcttaagaatgtgaaggacatcttccgagacaagaag
gaaaaatatgaagattttcttgaagtcatgaaagaattcaaggcacaaagaattgatact
gtcggtgtcatagcaagagtgaagcagctatttaaaggtcatcgtgacctgattttgggc
tttaatacgtttttgccaaaaggatatgcaataacttgtcctcttgaggatgaaacacct
cctcaaaagaagaagcctgttcaatttgaagaagctatcaactttgtcggtaagattaag
acacggtttgaaggtgataaccatgtatacaagtcatttttagaaattttgaatttgtac
aggaaggaaaacaagtctataagtgaggtctaccgggaggtttctgcactgctgcacgac
cacccggaccttcttagggagtttgttcattttctgcctgatgcttcagccacaacctca
aataatcacatgtcatctatgagaaattctgtgcttcgtgatagaaattcttccatacca
cctattcaacaaaaagagagaacaatggctccacatgctgaccacgacattgttcatcat
cctgattgtgacaacgctagagttactataaatggcgataaagagaaatgtcagcacagt
gaaaaagagaaggatatgagagacaacacagatagtatggaacagtatagggatgctgat
aaaaaatttaatgagcatgataacggtaaggacatcagcatgcaaagtttttcccagaag
aggaaacctaccattagagttgaagatacaacttcagtgaaattgcatctaggtggagaa
ggtatgtcttttattgagaaggtaaggcagaagttaccaaatgttgatgtttaccaagaa
tttgtgaagtgccttgatatatttgacaaggaaataatcactcgatcagaactgcattct
ttggtgagagatttacttggaagatatccagaccttatggatgcttttggtgaatttatg
acactttgtgacagaactgatgggcttctagcagatatcatgagtaaaaaatccttgtgg
aatgaaggtagtttaccaagatcggcgaaggtagaggaaaaggatagaaatcgagatcat
gaaagggaggatggtgttaaagaccgagaccatggaaatcgagaaagggataatagactt
gaaaaaagtgttgcttttggctataatgatgttggtagccagaagatgtctttattttct
agtaaggacaaatattttgcaaaacctatcaatgaacttgacctctctaattgtgagcgg
tgtacacccagttaccgtcttctcccaaagaattatccaataccctttgctagtcagaga
acagaaattggtgctcaagttttaaatgatcattgggtttctgtcacttcaggaagtgag
gattactcttttaaacacatgcgtaaaaatcagtatgaagaaagcctctttcgttgtgag
gatgacaggtttgaattggatatgttgttagaatctgttaatgtaacatccaagcgtgtc
gaagacttattagaaaaaatcaacttgtcggacagtccagtccatattgaagatcattta
acagcacttaatttgagatgcattgaacgcttatatggtgatcatggccttgatgtgatg
gatgtgttaaggaagaacgcacctctttctctccctgttatattaacccgcttgaagcaa
aaacaagaagagtgggcacggtgtcgatctgattttaataaagtttgggctgaaatatat
tttaagaattatcagaaatctcttgatcatcgcagcttctatttcaagcagcaggataca
aagagcttaagcacaaaagctttgttatctgagatcaaggaaattaatgaaaagaagcat
aaggaagaggatgtactgctcactattactgcagaaaacaaacgacctataattccaaat
ttggaatttgactatcctgatcaggatattcatgaagatctctatcatcttatcaaatat
tcctgtagagaactatgctccacagatcagtctgataaagctatgagaatttggacaacc
ttcctggagcccatgcttggtattccttcacggccccagggtgccgaggattccaaagat
attattagagaaaataattttgcgattagaggtactgcaattggtatggtagagattagt
ggtagttctattggtggaggtgccgagtccaagctgccagatcctcccagaattgaagtt
gaaggtgttccacctaaacaatcaagcccttgcagggtttggcccatgaatggagattct
tgtcttgaagaaaatatttttcacaaagcaaaccgtgttgacagcaaggttgatggtctc
tgtaaattgcagttcaacaacaaacaagagcattctaatgagaggttggtaaaatccaat
gtgttggttagcgctgtgctcgaacaagggaatggaaaagtaattgtagaaactgcatca
gggctgcgttccactccatccagaacttggaatggtagtgttgataaagggcttgagtta
gtatcatcatcacaggggggtggtccatcaaggccactgttgtccaatggtgtgatggca
gaaggctcaaatgctcctagtttcaatgaaaaatgtgatggacactcaaagatagagaga
gaagagggcgaattatcaccaaccggagaacttgaggataatttttcaaattatcaagat
gctagtctcgataaagcaaaacacagtgcctcgggcaggcaatgtttcagaacccatgca
gacaaaatatcttgcaggaatgtggcaggagaaatgcatatcgatgctgatgatgaaggg
gaggaaagtgctaggcggtcatccgaggacagcgaaaatggttctgagaattgtgatatt
tctggaaccgagtctgttgatggagaggacagtactcgtgaagggcaggaagacaggggt
catcatgaccgtgatagtaaggttgagagtgatggcgaggctgaaggaatggatgatgcc
catagtgctgggggtgatggaacagtattacctttctcagaacgttttcttcttaatgtg
aagccacttgccaagtacgtcccattggcattacgcaatgaaaaaaagaactcccggatt
ttttatggaaatgactccttttatgtcctttttagacttcaccgaacattgtacgagcgg
atacgatcagcaaagattaattcatcatttggtgagaggaagtggagggcttcaaatgat
actagccctaatgatctctattccagattcatgagtgcacttcgtagtttactcgatggc
tcctctgataatatgaagtttgaggatgactgccgatctattattggaacccagtcgtat
gttctattcactttggacaaattgatttataaactcgttaaacagcttcaaacagttgct
actgatgagatagaatccaagcttcttcaattatatgcatatgagaattcaagaaaacgt
ggaaaagatgtagacacagtttatcatgataatgcccgtgtgcttcttcatgacgatagc
atctaccgaatcgaatgttcatgtagtccaggtcatctatccattcagctaatggaattt
ggcaatgataagcctgaagtgacggctgtttcactggatcccaatttctcaggttacctg
cacaatgatttcctctccattctcccggacgaaaaagagcagtctggaatctacttacac
agaaataagtgcaagcttgtctgcagtgatgaaatttctgctgcatgccaggccatggaa
ggacttaaggttgttaatggtttggagtgtaaaatcacatgcaattcatcaaaggtctcc
tacgttttagatacagaagactatttgtttcgcacaaaaggcagacgaagaagtttgcat
agaagtggttcatgccgtcaccaccagtcaaggtcttcaaatggaagctcaagcagagga
caacgatatcaacgatggctgtcaagctcatga
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