Benincasa hispida (wax gourd): 120079195
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Entry
120079195 CDS
T07258
Name
(RefSeq) protein CHROMATIN REMODELING 20
KO
K10779
transcriptional regulator ATRX
Organism
bhj
Benincasa hispida (wax gourd)
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bhj03000
]
120079195
03036 Chromosome and associated proteins [BR:
bhj03036
]
120079195
Transcription factors [BR:
bhj03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
120079195
Chromosome and associated proteins [BR:
bhj03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
120079195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
ADD_ATRX
N36
Lyase_aromatic
Motif
Other DBs
NCBI-GeneID:
120079195
NCBI-ProteinID:
XP_038889289
LinkDB
All DBs
Position
6:complement(29511738..29600576)
Genome browser
AA seq
1493 aa
AA seq
DB search
MEEKHEDVDDVGSASGDSFIDDSEDDGPSTSGKDDQLHLEEPLTEQEIEDLVAEFLEVES
KAAEAQEALEKESLAKVENEVREELALILNGDDLETAIANEMATFIEEWEVVLDELEIES
AHCCSFEQLDGAGIELPSLYKLIESQASNGCFTEAWKKRIHWVGSQATGDLLASVSDAEK
TLQIERPVRRRHGKLLEEGASGYLQRKCSTHEIEGIGTENSEVDWCSLNKVFSEGSKDND
TLFGSKNWASVYLASTPQQAAEMGLKFPGVDEVEEIDDVDGNSCDPFVAAAIENEKELVL
SEEQKKNFRKVKEEDDAFFDRKLQIHLKQKRYQKRCKQEVFQKDVFPRDEEQPASLADCL
NPVSDDNTDGRRMGFSDDDIGDACHKIKVDIPNGSGASSDVDMERSMEHTASVLPSALSD
FVEPLGSKRLNDMEDLTTQTKKSRTNGVHNDESSLIKEHSAFNLTTSNTICNTEQNDHGA
DSLPSECPNEKMRCTACDQVVIKVYAHPFLKVIVCADCKCLMDDKKNVKEPDCSECFCGW
CGRNADLVSCKSCKTLFCIGCIRRNLGVECLLKAQASGWHCCRCCPSLLQPLRTQLEEAL
GFGELTGSSSDSDSDNPNADINITISSKRKRKKKIRRILDDAELGEDTKKKIAIEKERQE
RLKSLQVQFSSNSKMMNSAGFCGSLSEGASAEVLGDASMGYIVNVVREKGEEAVRIPPSI
SSKLKTHQISGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSA
DLGLRTALIVTPVNVLHNWRQEFFKWKPSELKALRIFMLEDVTRERRAELLAKWRAKGGV
FLIGYSAFRNLSLGKHVKDRHMAKEICHILQDGPDILVCDEAHMIKNTKADITQALKQVK
CQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTLDDVKI
MNQRSHILYEQLKGFVQRMDMTVVKKDLPPKTVFVISVKLSPLQRKLYKRFLDVHGFNNG
KDSSEQLRKRSFFAGYQALAQIWNHPGILQLTKEDKYYVKREDAIENFLAGDSSSDENID
SNICTGDKPMNANGNHQDKFVSGFFVKDWSNGLLHANSYKEVDYGGKMVLLLEILTMCSE
LGDKALVFSQSIPTLDLIEFYLSRLPRRGKRGKFWKKGKDWYRLDGRTESSERQKIVERF
NEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFA
YRFLAHGTMEEKIYKRQVTKEGLAARVVDRQQVYRTISREEMLHLFEFGDDENLEASTEL
DQGNGHTSHQIMTGHHGNVLKQKGPLSHGSCSSDKLMETLLGKHHPRWVANYHEHETLLQ
ENEEEKLSKEEQDMAWEVYRKSLEWEEVQKVPPGDVISEQKLTTPTIAHPIPETIDLAQS
RARNRFVSRKCTNLSHLLTLRSQGTKVGCSTVCGECAQEISWEDLNKDGKLGK
NT seq
4482 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaagcacgaggacgtggatgatgtagggagtgcgtccggcgattcttttatc
gatgattcagaagacgatgggccatcaacatctgggaaggatgatcagttgcatctcgag
gaaccgttgactgagcaagaaattgaggatttggtggccgagttcttggaagttgagagt
aaggctgcagaagctcaagaagcacttgaaaaggagtctcttgccaaagtggagaatgaa
gttcgagaagaattggcattgattcttaatggtgatgatttggaaacggccattgcaaat
gaaatggctacttttatagaagagtgggaagttgtgctcgatgagcttgagattgagagt
gctcattgttgcagctttgagcaacttgatggtgctggtatcgagctaccaagtctctac
aagctaattgaaagtcaggcttctaatggttgctttactgaagcttggaaaaaaaggata
cactgggtagggtctcaggcaactggtgatcttcttgcatctgtatctgatgcagagaag
accctccaaattgaaaggcctgtaaggagacgacatggtaaactgctggaggagggagca
agtggatatctgcagaggaaatgttccactcacgagatcgagggaattggtacagaaaat
tcggaagttgattggtgctctcttaataaagttttttcagaaggctcaaaggacaacgac
acattgttcggcagcaagaactgggcttctgtttacttggctagcactcctcaacaagct
gcagaaatgggactcaaatttcctggagttgatgaggtagaggagatagatgatgttgat
ggaaattcttgtgatccgtttgttgcagctgccattgaaaatgaaaaagagttggttctt
tctgaagaacaaaagaaaaatttcagaaaggtcaaagaagaagatgatgctttttttgat
agaaaactccaaatccatttgaaacaaaagcgatatcagaagagatgcaaacaggaggtc
ttccaaaaagatgttttcccaagagatgaagagcagcctgcatctctggctgactgtttg
aaccctgtttcagatgataacactgatggacgtcgaatggggttctctgatgatgatatt
ggagatgcttgccacaaaatcaaggttgacatacccaatggttctggtgcttcaagtgat
gttgacatggaaaggtctatggagcatacggcttctgtgcttccttcggctttatctgat
tttgtggaacctctaggttccaagcgtttaaatgatatggaagatttgaccactcaaact
aaaaagagtcgaactaatggtgtacataatgatgaaagttccttgataaaggagcattct
gctttcaatctgacgacatcgaacaccatatgcaacacggaacaaaatgaccatggtgct
gattctcttccatcagagtgtccgaatgagaagatgcgttgtactgcttgtgatcaagtg
gttattaaagtgtatgcacatcctttccttaaagtaattgtttgtgcagattgcaaatgc
ttgatggatgacaagaagaatgtaaaggaacctgattgctctgaatgcttttgcggatgg
tgtgggcgcaatgctgacttggtaagctgtaaatcatgtaaaacactattttgtattggt
tgcataaggagaaaccttggtgtcgagtgtttgctcaaggcccaggcttctggctggcat
tgttgtcgttgttgcccaagtctcttgcaacccttgagaacgcagttggaggaagcctta
ggatttggagagttgacaggttcgagctctgatagcgattcagacaatccaaatgcagat
ataaatataaccataagctcaaagagaaagcgtaagaaaaagatacgacggatacttgat
gatgctgaattaggagaagatactaaaaaaaaaattgccatagaaaaggaacgccaagag
cgtctaaaatcattacaagttcagttttcctccaattctaaaatgatgaactctgctggc
ttttgtggaagtctatctgaaggtgccagtgccgaagtccttggtgatgcctcaatggga
tatatagtgaatgttgtgagggagaaaggagaagaggccgtcagaattccaccaagcatt
tcatcgaagttgaaaacccatcagatttctggaataagatttatgtgggaaaatatcatt
caatcaatacggaaagtgaagtctggtgataaaggtcttggatgcattcttgctcataca
atgggccttggtaaaacttttcaggttatagcattcttatacactgcaatgagaagtgca
gacttgggtttacgaacagcacttattgttacccctgttaatgtgttgcataattggcgg
caagaattcttcaagtggaagccttcagaattaaaggctcttcgcattttcatgctggaa
gatgtaacaagggagagaagggccgagttgcttgctaagtggagagctaagggtggtgtc
tttttaattggttatagtgctttccgaaacttatcacttggtaaacatgtcaaggaccga
cacatggctaaagaaatttgccacatcttgcaggatggaccagatattcttgtatgtgac
gaggcccacatgattaagaataccaaggctgatataactcaggcattgaaacaagtgaaa
tgccaaaggaggattgcgttaactggatcaccactacagaacaatctcatggagtattat
tgtatggttgattttgtgagagaaggtttccttggaagtagccatgaatttaggaatcgc
ttccagaaccctatagagaatgggcagcatactaattcaactctggatgatgttaaaata
atgaaccagaggtctcatatcctatatgaacaattgaaagggtttgttcaaagaatggac
atgaccgtggtgaagaaggacttgccacctaaaactgtctttgtgatatccgtcaaactc
tctcccttacagaggaagttatacaaaagatttctcgatgtgcatggatttaataatggc
aaggattctagtgaacagttaaggaagaggagctttttcgctgggtaccaagcactggcc
cagatctggaatcatcctggaatcctgcaattgaccaaagaagacaaatattacgtgaag
cgtgaagatgctattgaaaattttcttgcaggcgattcctccagtgacgaaaacatagat
tctaatatttgcactggagataagccaatgaatgccaatgggaatcatcaggataaattt
gttagtggctttttcgttaaggattggtcgaatggtctgcttcatgcaaatagttacaag
gaggtagattacggtggcaaaatggttttgctgctagagatcttaaccatgtgctctgaa
ttgggtgataaggcattggtattcagccagagcattcctacgcttgatctaattgaattc
tatctttcaagattgcccagacgtggaaagagaggaaaattttggaagaagggtaaagat
tggtataggctagatggaagaaccgagagttctgaaagacagaagattgttgagaggttt
aatgagccgctaaataagagggtgaaatgtaccttgatatcaactagagcaggatcattg
ggcatcaatcttcattctgctaaccgtgttatcatagtggatggttcttggaatccaact
tatgatcttcaggccatttatcgagcttggagatatggccaaacaaaacctgtgtttgct
taccgatttttggcacatggaacaatggaagaaaaaatttataagcgtcaggtaacaaag
gagggactggctgcaagagttgttgatcgccaacaggtataccgaactatttctcgggaa
gaaatgttgcatctttttgaatttggtgatgatgagaatctcgaggcttccactgagttg
gaccaaggaaatggacatacatctcaccagattatgactgggcatcatggaaatgtgctg
aagcagaaggggcctctttcccatggtagttgctcatctgacaagttaatggaaacgtta
cttggcaaacaccatccaaggtgggttgccaattaccacgagcacgaaacgctactccaa
gagaatgaagaggagaaactatccaaggaggagcaagacatggcatgggaagtataccga
aaatcattagaatgggaggaagtgcagaaagttccaccaggggatgttatatctgagcaa
aagttaaccacgcccaccatcgcccatcctatacccgagactatcgatctggcacaatca
agagcaaggaaccgattcgtttctcgtaaatgcactaatctttcccatttgcttacactc
agaagtcaggggacaaaggttggttgtagtacagtatgtggggaatgtgcacaggagata
agctgggaagacctcaacaaagatggcaagttagggaaatga
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integrated database retrieval system