Benincasa hispida (wax gourd): 120079449
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Entry
120079449 CDS
T07258
Name
(RefSeq) elongator complex protein 1 isoform X1
KO
K11373
elongator complex protein 1
Organism
bhj
Benincasa hispida (wax gourd)
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bhj03016
]
120079449
Transfer RNA biogenesis [BR:
bhj03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
120079449
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
HB_ELP1
TPR_GEMI5
DUF6568
Motif
Other DBs
NCBI-GeneID:
120079449
NCBI-ProteinID:
XP_038889561
LinkDB
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Position
6:17174529..17182068
Genome browser
AA seq
1317 aa
AA seq
DB search
MNNLKLYSESLLKLELQTDEEVIQFSAFDIERNRLFFLSSANFIYTTQLTSFHDGVMKSV
AMLPAEVHPINVETGDYVTSFDYLMEKETLIVGTRNGILLLFSVDGNGSEVVGRVEGGVK
RISPSPDGDLLCIISGLRQILVMTHDWDLMYENNLEDFLEGEPNLSEQNDFEGSISWRGD
GKYFVTLSDVENSNTALKKLKIWERDGGSLHASSESKTFVGGVLEWMPSGAKIAAVYDKK
SESEFSTIVFFERNGLERSSFCINEQIGAKVELLKWNCSSDLLAATVRCGNYDSVKIWFF
SNNHWYLKHEIRYSKQDVVRFVWDPTRPLQLFCWTVHGQITMYNFMWISAIMENSTALVI
DDAKILVTPLSLSLMPPPLYLFSLKFSSAVRDVAFFSKISKNCLAALLSDGRLCIVEFPA
VDVWEELEGKEFYVEASTSESTFGSFQHIVWLDLHKLLVVSHYGFDYYNYISQGSPNEEP
FGFCLLEIDLESPKDHILGLPACSGWYARISNRKFIEGPVICVASNPAENCTAFVQLNGG
RILKYASGSGLSCEFLKEEDKSFSSSCPWMSVALVDNNGLLKPLLFGLDDVGRLHLNRMV
VCNNCSGFSFYSNLGDQITTHLILATKQDMLCILDIPDVLHEKIEEKYNFFQASSKCKEE
ESRNFIYIWERSAKIVGVLHGDAAAVILQTTRGNLECVYPRKLVLASITNALIQGRFRDA
LLMVRRHRIDFNVIVDYCGLQAFIQSAAEFVKQVNNFNYITEFVCAIKNEDVTETLYKNF
ISSSCTDDSKVGAWREAKDSYVKNKVSSVLLATRKAVEEHMMESPARELCILTTLARSDP
PALEEALERIKVIREIELLNSDDPRRISYPSSEEALKHLLWLSDPDAVFETALGLYDLKL
AAIVAINSQRDPKEFIPHLQELEKMQFLLMCYNIDLRLSRFEKALKHIVSAGEDHFSDCI
NLMKKKPQLFPLGLQLITDNAKRKLVLEAWGDYLIDEKSFEDAAETYLCCFNLEKALKSY
RASGNWSRVFIVAGFLKMREDEILQLAHELCEELQALGKPGEAAKIALEYCGDINRGMAL
LISARDWEEALRIAFMHQREDLISELKNASAECASLLIGEYEEGLEKVGKYITRYLAVRQ
RRLLLAAKVKAEESSMSNLDDDTASEASSNLSGMSAYSAGSKRSSAVSMSTTAGRKSREA
RRQKSRGKIRPGSPGEEMALVEHLKGMSLTAGARSELKSLLVSLMMLGKEETAKKLQRTA
ESFQLSQMAAMNLANDTISSDIINEQADTLENYVQVLKSEVQKLEVFSWRSRVFLSS
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
atgaataacttgaagctatattccgagagtcttctcaaactcgaattacaaaccgatgaa
gaagtcatacagttctccgccttcgacattgagcggaatcgtctcttctttctttcctcc
gccaatttcatttacactactcagcttacttcattccatgatggagtaatgaagagtgta
gccatgttgcctgctgaagttcatcctataaatgtggaaactggagattatgttacgtcc
tttgattatttgatggagaaagaaactttgatagttggaactcggaatggaattcttttg
cttttttctgtggatggaaatgggagtgaagttgttggcagggtggagggtggtgtgaaa
cgcatatcacctagtccagatggtgatttgttatgcataatttctgggcttcggcagatt
ttagtaatgactcatgattgggatttgatgtatgagaacaatctcgaggattttcttgaa
ggtgaaccaaacctttcagagcaaaatgattttgaaggttccatttcttggcgaggtgat
gggaaatactttgtgacactaagtgatgtagaaaattctaatactgcactcaagaagctc
aagatctgggagcgagatggaggttccttgcacgcttcatctgaatcaaaaacatttgtg
ggaggagttttggaatggatgcccagtggagctaaaattgcagctgtttatgataagaaa
agtgaatctgaattttctactatagtatttttcgaaaggaatggattagaaagaagttct
ttttgtattaacgagcaaattggtgcaaaagttgaacttctaaagtggaattgcagttca
gatctccttgcagctactgtcagatgcggaaattatgattctgtaaagatctggtttttc
agcaataatcattggtacttgaagcatgaaattcggtactcaaagcaggatgtggttagg
tttgtatgggatccaacaaggcctcttcagttattttgttggactgttcatggacaaatt
acaatgtacaactttatgtggatctcagctatcatggagaactcaacagcattggtcatt
gatgatgcaaagatattagtgacccctctttctttgtcactcatgccacctcctctgtat
ttattcagcttgaaattttcaagtgctgtccgtgacgtggcctttttctctaagatttct
aagaattgtttggctgccttattatcagatggccgtttatgcattgttgagtttcctgca
gtcgatgtctgggaagaactagaaggaaaggaattttatgttgaagcttcgacttctgaa
tcaacatttggctcctttcagcatattgtctggttggacttgcataaacttcttgttgtt
tcacattatgggtttgactattataactacatctctcaaggctcccccaatgaggaacct
tttggattttgtttattggaaattgatcttgaatctcccaaggatcatattctaggttta
ccggcatgttctggttggtatgcaaggatttcaaatagaaaatttattgaaggaccagtc
atctgtgtagcttcaaatcctgctgagaattgtactgcatttgtccagcttaatggtggg
agaattcttaagtatgcatctggatcaggcctttcttgtgaatttttgaaggaggaggat
aagagtttttcatcatcttgtccctggatgagcgtggctttggtggataataatgggtta
ctaaagccccttctttttggacttgatgatgttgggaggctccatttgaataggatggta
gtctgcaacaattgtagtggtttctccttttactcaaatttgggggaccaaataactacg
catttgattttagcaactaaacaggatatgctttgtattctagacattccggatgtattg
catgaaaaaatagaagagaaatacaatttttttcaagctagtagcaaatgcaaagaagaa
gaaagtagaaactttatctatatatgggaaagaagtgccaaaattgttggtgttctgcat
ggtgatgctgctgctgttatattacaaactactcgaggaaatctagagtgcgtatatcca
cgaaagttggtacttgcatctatcactaatgcattgatccaagggcgcttcagagatgca
cttcttatggttaggcgccataggatagattttaatgtcattgttgattactgtggttta
caagcatttattcagtctgcggccgaatttgtgaagcaggttaataattttaactatatc
actgaatttgtttgtgccataaaaaatgaagatgtaacagagaccctgtataaaaacttc
atatctagttcatgcactgatgacagtaaagttggagcatggagagaagccaaagattct
tatgtaaaaaacaaggtttcttcggtcctgttggccacaaggaaagctgttgaggagcat
atgatggaaagtccagcaagagagctatgcattttgaccacccttgcacgcagtgatccg
ccagcacttgaagaagctttggagagaataaaagtaatacgtgaaattgagctgttaaat
tctgatgacccaaggagaatatcttatccttcttctgaagaagctctaaaacatctctta
tggttgtctgaccccgatgctgtttttgagaccgctttaggcctttatgatttaaaactt
gctgctattgtggcgataaactcgcagcgggatccaaaagaatttatccctcatcttcag
gaactggagaagatgcaattcctcttaatgtgctacaatattgacctaagattgtcaaga
tttgagaaagctttaaaacatattgtttctgctggggaggatcatttttctgattgtata
aacctaatgaagaaaaaacctcaattattccctttgggacttcagttgatcacagataat
gctaagaggaaattagtccttgaggcatggggtgattatcttattgatgaaaaaagtttt
gaggatgctgcagaaacttatctctgctgtttcaatttggaaaaagctttgaagtcatat
cgtgctagtggtaactggagtcgggtgtttatagtcgccgggtttcttaaaatgagagaa
gatgagatattgcaattggctcatgaactctgtgaagagcttcaagctcttggtaaacca
ggtgaagctgctaaaattgccctagagtactgtggggatattaaccgtggtatggctttg
ttaattagtgctagggactgggaagaggctttgagaattgcttttatgcatcagagagaa
gatttaatatcagaactgaagaatgcatctgcagaatgtgcgagcttgcttattggtgaa
tatgaggaaggattggagaaagttgggaagtatataactcgatacttagctgtccgacag
agaagattacttcttgctgctaaggtcaaggcagaggaaagttcaatgagtaatcttgat
gatgatactgcgtcagaagctagtagtaatttgagtggaatgagtgcttactcagctggg
agtaaaaggagttcagctgtttccatgagcacaactgcaggtaggaagtcaagagaggca
agacgacagaaaagtagaggaaaaatccgtcctggaagtcctggtgaggagatggctctt
gtagagcatttaaagggcatgtctctaactgctggggctaggtctgagctaaaatcatta
ttggtttcccttatgatgctgggaaaggaagaaactgcaaagaagctccaacgaacagca
gagagctttcaactttcacaaatggcagctatgaaccttgcaaatgatactatttctagt
gatataataaatgaacaggcagacacattggaaaactacgtacaagtattgaaaagtgaa
gtccaaaaattggaagttttctcgtggcgttctagagtattcctttcttcatga
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integrated database retrieval system
