Benincasa hispida (wax gourd): 120079644
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Entry
120079644 CDS
T07258
Name
(RefSeq) nuclear pore complex protein NUP205 isoform X1
KO
K14310
nuclear pore complex protein Nup205
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120079644
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhj03019
]
120079644
03036 Chromosome and associated proteins [BR:
bhj03036
]
120079644
Messenger RNA biogenesis [BR:
bhj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120079644
Chromosome and associated proteins [BR:
bhj03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
120079644
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup192
Crystallin
Motif
Other DBs
NCBI-GeneID:
120079644
NCBI-ProteinID:
XP_038889840
LinkDB
All DBs
Position
6:54598223..54673423
Genome browser
AA seq
1884 aa
AA seq
DB search
MMSSKQNLHIIESALFGPSPPSPAQRVELLHAIHNSIPAFRSLLQFPPPKASDRAQVQSK
EVRRPDSSTITLDDQDVEITLKLSDDLHLNEIDCVHLLVAAHQEWDLTERDPLEIFRLAA
GLWYTERRDLIMSLHTLLRAVVLDPGYETGLISDIQRHLEDLVNNGLRQRLITLIKELNR
EEPAGLGGPSCERYLLDSKGALVERRGVVSRERLILGHCLVLSILVVRIGPKDAKDLFSV
LKDCAGELNETKAPIKLQIVFSLLFSIIIAFVSDALSAVPNKASVLSSDASFRNEFQDNV
MASGNDPTVEGFVDAVRFAWTVHLLLIHDMIDAREAIPSASPKDLDHLQSCLDIIFSHNA
FQFLLQEVIQTAAYQNDDEDMIYMYNAYLHKLVTCFLSHPLARDKVKESKDRAMHTLSQF
RATGSQDFMHDGDSSFHQASETVPSPFVSLLEFVSEIYRKEPELLSSNDVLWTFANFAGE
DHTNFQTLVAFLNMLSTLACNEEGASRVFELLQGKAFRSVGWTTLFDCLSIYDEKFRQSL
QTAGALLPEFQEGDAKALVAYLNVLQKVVENGNPLERKNWFSDIEPLFKLLSYENVPPYL
KGALRNAIASFIEVSSELKDIIWRYLEQYDLPVLVASHIQNSTKPITSQVYDMQFELNEI
EARQERYPSTISFLNLLNALIGKERDLSDRGRRFVGIFRFVYDHVFGPFPQRAYADPVEK
WQLVVACLQHFLMILKMYDIKEEDIDIVIDRSQSSMESQSSSLQTQLPVLELIKDFMSGK
SVFRNIMGILLPGVSSLINERTSQIYGQLLEKSVELSLEIMILVLEKDLLLADYWRPLYQ
PLEVILSQDHSQIVALLEYVRYEFYPRIQQLSIKIMSILSSRMVGLVQLLLKSNTASSLI
EDYASCLEIRSEECHIIENSGDDPGVLIMQLLIDNISRPAPNVTHLLLKFNLETSIERTV
LQPKFHYSCLKVILEILEKLSNPEVNALLYEFGFQLLYELCLDPLTSGPVVDLLSNKKYY
FFIKHLDTIGVVPLPKRNNHTLRVSSLHQRAWLLKLLAIELHAADLGSPIHREACQSILA
HLYGQEIVDTGSGPVFSLQNHGVDPGIRTTSKSKALELLEVVQFRTPDTSIKLPQVVSNL
KYELLTKDILGNPSTSQKGGIYYYSERGDRLIDLTSFCDKLWQKFNSDNPQLNNIGSEAE
LEEVKETIQQLLRWGWKYNKNLEEQAAQLHMLTSWSQAIEVTVSRRISSLENRSDILFQL
LDASLSASASPDCSLKMAYLLCQVALTCMAKLRDERYSCPGGLNADSVSCLDIIMVKQIS
NGACHSILLKLIMAILRNESSEALRRRQYALLLSYLQYCQNMLHPDVPTTVLQVLLLNEQ
DGDDVDLQKIDKDQAELAHANFSILRKEAQSILDVVLKDATQGSEPGKTISLYILDALIC
RDHDRFFLNQLQSRGFLKSCLISISNVSLQVDGAHSFDSLQRACTLEAELGLLSRISHKY
GKFGAQLLFSTGALEHLASCRLVNLQGGLRWIDMKPHRDVAGNINKRQSIITPILRLLFS
LTSLVDTSDFFEVKNKIVREVVDFIKGHQRLFDQILGEDVSEADDLTLEQINLLVGSLGK
VWPYEETDEYGFVQSLFQLMHSLFSLEMNSLSSGPGVKLLKNRRSSELYSIELNYSLISY
LYFLVTRKSLRLQISSASSGHNSPVRSQRPSLDLLGTLLNSMTSTLERAAEERSLLLNKI
QDINELPRQDVEEIIVLCIGKYFASLSDNIQRRRYVAMIEMCKVVGNKNQMITLLLPLAE
YVLNIMLIHFQDSTIIPDGNANIKAISYHAESDSAQEITSLCGKLIPILERLELLSENKV
GHNLKVFRRLVTSLKELAIQKLAL
NT seq
5655 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcctccaagcagaacctccacattattgagtcggccctttttggtccttcccct
ccgtcgccggctcagagggtcgagctcttacacgccattcacaattctatacctgctttc
cggtcgctgcttcaatttcctcctccgaaagcttcagaccgtgcacaagttcaatctaaa
gaagtcaggcgaccagattcttcaacaataacgctcgatgaccaggacgtcgaaattact
ttaaaattgagcgatgacctccatctcaatgaaatagattgtgtgcatctacttgttgct
gcacatcaagagtgggatttaacggagcgagatcctttagagattttccgtcttgcagca
gggctttggtatacagagagaagagatctaataatgtcactccatacactactgagggct
gttgtactggatccgggatatgaaactggccttatatctgacatccaaagacacctggaa
gatcttgttaataatgggctaagacagcgattgattactttgataaaggaacttaatcga
gaagaaccagctggtttgggtggacctagctgtgagcgctaccttcttgattctaaaggt
gctcttgttgagcgtcggggtgtggttagtcgggaaagactaatacttggacattgtctt
gtcctttctattcttgttgttcgaataggtccaaaggatgcgaaggatctcttttctgtt
ttaaaagactgcgctggtgagcttaatgagaccaaagctcccataaagctccagattgta
tttagtctccttttctctatcattattgccttcgtgtcagatgctttgagtgcagttcca
aataaagcgtccgtgttgtccagtgatgcttcttttagaaatgaatttcaggataatgtg
atggcttcgggaaatgatccaacagtggaaggatttgttgatgccgtaaggtttgcttgg
actgttcatttgctgttaatacatgacatgattgatgcaagagaagccattcccagtgct
tcgcctaaagatttggatcacttacaatcgtgcttggacataattttttcccataatgct
ttccagtttttacttcaagaagtgatacagactgcagcttaccagaacgatgatgaggat
atgatctatatgtacaatgcttatctgcacaagctggttacttgttttttgtctcatcct
ttggccagggataaggtgaaagagtcgaaggacagagccatgcacacacttagtcagttt
cgtgctactgggtcacaagatttcatgcatgatggtgattcaagtttccatcaagctagt
gaaactgttccttcgccttttgtctcccttttggagtttgttagtgaaatttatcggaaa
gagccagaactgttgtcaagcaacgatgtcttgtggacatttgcaaattttgctggggag
gatcatacaaattttcagacgttggtggcattcttgaatatgctgagtaccttagcttgc
aacgaagaaggtgcttcaagggtttttgagttacttcagggaaaagcattccggtctgtt
ggatggaccaccttatttgattgcctatcaatttatgatgaaaaatttagacagtccctc
caaactgctggggccctgctaccagaatttcaggaaggtgatgcaaaagcacttgtcgca
tatttgaatgttcttcaaaaggttgtggagaatgggaatcctcttgaaagaaaaaactgg
ttttctgatattgaaccattgttcaaacttcttagctatgagaatgtccctccttatctg
aagggtgctttgaggaatgcaattgcatccttcattgaagtctcttctgagttgaaggat
ataatttggcgctatcttgagcagtatgatttacctgttcttgttgcatcccatattcag
aatagtacgaagcctattacttctcaggtttatgatatgcaattcgagttgaatgaaatt
gaagcgagacaggagagatatccatcaacaatatctttccttaacctgttaaatgctctc
attggtaaagaaagggatctaagtgatagagggcgcagatttgttggaatatttaggttt
gtttatgatcatgtttttgggccattccctcaacgagcctatgcagatcctgtcgagaaa
tggcagttagttgttgcttgtcttcaacattttctcatgattttgaaaatgtatgatatt
aaagaagaggacattgacattgttattgaccgatcacagtcatcaatggaatcacaatca
tcttcacttcaaactcaattaccagtccttgagttgataaaagatttcatgagtggaaaa
tctgtttttagaaacatcatgggtattcttctgcctggtgtcagttctctcataaatgaa
aggaccagtcagatttatggccaacttttggagaagtctgtggaactttctcttgaaata
atgatacttgtattagagaaggatttacttctggctgattattggcgccctctatatcag
cctttggaagtcattctctctcaagatcacagtcaaattgttgcactgttggagtatgtc
agatatgaattttatcccagaattcagcagttgtctatcaaaataatgagtattttaagt
tctcgtatggttgggcttgtgcagttactactaaaatctaatactgcgagctctttaatt
gaggattatgcatcctgccttgaaataagatctgaagagtgtcatataatagaaaatagt
ggagatgatcctggtgttcttataatgcagcttcttattgacaacattagccgaccagct
ccaaatgtcacacatttgctacttaaatttaaccttgagacatccattgagcggacagtt
ttgcagccaaaatttcattatagttgcttgaaggttattctcgagattttggaaaagctt
tcaaatcctgaagtcaatgccttactttatgagtttggttttcagcttctttatgagcta
tgtttagatcctctaacatctggaccagtcgtggatctcttgagcaacaagaagtactat
ttctttattaagcacttggatacaattggtgttgttccccttcccaagagaaacaatcac
actctccgtgtcagttcccttcatcagagagcatggttgcttaaacttttagcaattgag
ttgcatgctgctgacttgggtagcccaatccatcgagaggcatgtcagagtattcttgcg
cacctgtatgggcaggagatagttgatactggatcaggtccagtcttctcacttcaaaat
catggggtagatcctggaattagaactaccagtaagagcaaggcattggagctacttgag
gttgttcagttcagaactcctgatacctcaatcaaacttccccaagttgtttcaaatttg
aagtatgaattgctgacaaaagacatacttgggaatccttcaacttctcaaaagggtggg
atctattattattcagagcgtggtgatcgcctgattgatcttacttccttttgtgataaa
ctttggcagaaatttaattcagataatccccaactgaataacattgggagtgaagctgag
ctggaagaagtaaaagaaaccattcaacagttactacgatggggatggaaatacaacaaa
aatcttgaggaacaggctgcacaacttcatatgttaactagctggtcacaagccattgag
gttaccgtgtccagaagaatatcatcacttgaaaaccgatctgatattctattccaactt
cttgatgcctccttgagtgcgtctgcttctcctgattgttctttgaagatggcatatctt
ttgtgtcaggtcgcactgacatgcatggccaagctaagggatgaaagatattcatgtcct
ggtggtttaaatgctgatagtgtctcatgtcttgatattatcatggtgaagcaaatatct
aatggggcctgtcactctattttactaaagctcatcatggccattcttaggaatgaatca
tcagaagctttaaggagacgccaatatgctttgcttcttagctaccttcagtattgtcag
aatatgctgcatccagatgttccgacaacggttctgcaagttctacttctaaatgaacaa
gatggagatgatgttgatttacaaaagattgacaaggaccaggcggaacttgctcatgct
aatttttcaattttacgtaaagaggctcaatctatcttggatgtggttctcaaggatgca
actcaaggcagtgaaccagggaagactatatcactctacattctggatgcattaatctgt
agagatcatgacagatttttcctgaaccaacttcagagcaggggatttttgaagtcttgt
ttgatcagcataagcaatgtttcacttcaggtggatggtgctcattctttcgattctttg
caacgagcttgcactcttgaggctgaacttggcttactgtcaagaattagccacaagtat
ggaaaatttggggcccagcttctcttttccacgggcgctttggagcaccttgcgtcatgc
agattagtcaatttgcagggaggattgaggtggattgatatgaagcctcatagagatgta
gcagggaatattaacaagcgacaaagtatcataacaccaattttgagactgctgttttct
ttgacgtcattagttgacacgtcggattttttcgaggtgaaaaataaaattgttcgagaa
gttgtagattttattaaaggacaccagcgactgtttgatcaaatacttggcgaggatgtt
tctgaagctgatgatttaacattggagcagattaatcttctggttggttcgcttggcaag
gtttggccatatgaggagactgatgaatatggttttgttcaaagtctcttccaattgatg
cattcacttttctctcttgaaatgaattctctttcttctggcccaggagttaaattgctt
aagaacaggagaagttcagaactttactccattgagctgaactacagtttgatctcttat
ttatattttctagttacaaggaaatctctaagattgcagatctctagtgcttcctctggc
cacaactctcctgttaggtctcagcggccttctttggatttgctcgggacactccttaat
tctatgacttctactctcgaaagagcagctgaagaaagatcattgctattaaataagatt
caagacataaatgagctgccgagacaggatgtagaggaaattattgtactgtgtattggc
aaatattttgcttcattatccgataacatccagagaaggagatatgtagccatgattgaa
atgtgcaaggttgttggaaataaaaatcagatgattacattattacttcctcttgctgaa
tatgtcttaaatatcatgcttatccatttccaagatagtaccattattcctgatgggaat
gcgaatattaaagcaatttcatatcatgctgagtctgactcagcgcaggaaataacttca
ttatgtggcaaattgattcctatcttagaaaggcttgagctgctaagtgagaataaagta
ggacataatctgaaggtgtttcgcagattagtgacttcactgaaggagctggccattcaa
aagttagctctatga
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