Benincasa hispida (wax gourd): 120079773
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Entry
120079773 CDS
T07258
Name
(RefSeq) DNA-directed RNA polymerase 2, chloroplastic/mitochondrial-like isoform X1
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
bhj
Benincasa hispida (wax gourd)
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
bhj03029
]
120079773
Enzymes [BR:
bhj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
120079773
Mitochondrial biogenesis [BR:
bhj03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
120079773
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
Methyltransf_29
ULD_2
DUF3381
Motif
Other DBs
NCBI-GeneID:
120079773
NCBI-ProteinID:
XP_038890080
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All DBs
Position
6:7379739..7397809
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AA seq
1028 aa
AA seq
DB search
MSFCQCSSNLTSKFDNFLLLKNPTIFHENPPMISTSMWKTLAKQAICRNRQFHLGWHCFS
CSSGVLGRPNESLFREKLISGNFVLSSLPKFGSWEMGIGRNEVLSQEDYGSRLCFGSMGA
RIGLNGSCSKGYSSVAEAVSSTDVDEDASVDNEIQELLQEMSKEEKRQVTCSWRRRMKMV
KGMGAGKYQMLRRRQVAIETEAWEQAVKEYKELLMDMCEQKLAPTLPYMKSLFLGWFEPL
CDAISKEQELIRQGKNRTPYAPYFDQLPADMMSVITMHKLMGLLMMGHERGNTRVVQAAC
VIGDAIEQEVRIHKFLEKKKKKTHDKDNENNDQPDSQMKEHEGLRQKVSNLIKKQKLPAV
RQILKGTDDSRPWGQDAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFRHSLRTV
MKKATKNSGRRYGVIECDPLVVKGLERTARHIVIPYMPMLVPPVNWTGYDKGGHIFLPSF
VMRTHGAKQQREAVKRAPKQQLAPVFEALDTLGSTKWRINVKILSVVDRIWTSGGRLADL
VDRDDVPFPEKPDSEDEVLLRKWKWKVKSVKKENMERHSQRCDIELKLAVAGKMKDEEGF
YYPHNIDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLRKSGLGWLKIHLANLFAGGVD
KLSHDGRMTFIENHLEDIFDSADRPLEGRRWWLNAEDPFQFLAACMNLTEALRSSSPETF
ISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYLGIAARVLEIMRRDAQK
DPATFPDALRAKTLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAISDDSDLF
GCSCYAAKTTMTALGEMFEAARGIMNWLGDCAKIIASENQPVRWTTPIGLPVVQPYRKLG
EHHIKTSLQVLTLRRETDKVLTRRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVH
DSYWTHACDVDEMNRILREKFVELYETPILENLLEGFQRSFPGLVFPPLPELGEFDLKEV
LESPYFFN
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgtccttttgccagtgttcttccaatcttaccagcaaattcgataatttccttctgttg
aaaaaccccacaatttttcacgaaaaccctccgatgatatccacgtctatgtggaaaacc
cttgcaaagcaagctatttgtaggaaccggcagtttcatcttggttggcattgcttttcc
tgctccagtggcgttctgggtcgtcccaacgagtctttatttcgcgaaaaattgatatct
ggtaattttgttcttagttcacttcccaagttcgggagttgggaaatgggcattggtcga
aatgaagttttgtctcaagaagattatggaagcagattatgttttgggtctatgggagct
cggattgggttaaatgggtcgtgctcgaaaggctattctagtgttgctgaggcggtttcg
tcaacagatgtggatgaagatgcatctgtggacaatgaaatccaggagttattgcaagag
atgagcaaagaagagaagaggcaggttacgtgtagttggaggaggaggatgaaaatggtg
aagggaatgggagcagggaagtatcaaatgttgaggaggaggcaggtggccatagagact
gaggcgtgggaacaggcagttaaggagtacaaggagctattgatggacatgtgtgagcag
aagttagcacctactttgccatacatgaagtccttgttccttggctggttcgagcctttg
tgtgatgctataagtaaagagcaagaattaatccggcaagggaagaacagaacaccatat
gctccttattttgatcaattacctgctgatatgatgtcagtaatcacgatgcataagttg
atgggattgttgatgatgggacatgagcgtggtaataccagggttgtgcaggctgcttgt
gtaataggagatgctattgaacaggaggtaagaattcacaaattcttggagaaaaagaaa
aagaaaacgcatgacaaagataatgagaacaatgaccagcctgattctcaaatgaaggaa
catgaagggttaaggcaaaaagtgtccaacttgattaaaaagcaaaagcttccggctgta
agacagatattgaagggaaccgatgattcaagaccatggggccaggacgccaaagcaaag
gttgggagccgtctaattgagttgttgacacaaacagcttacatacaacctcctgccgat
cagttggctgatggtccacctgatattcgtcctgcatttcgtcactcacttagaactgtg
atgaaaaaagcaaccaagaattctggcaggagatatggtgtcattgaatgtgacccttta
gtcgtcaaaggcttagagaggactgcaagacacatcgtgattccctatatgccaatgttg
gtgcccccggttaactggactggctatgacaaaggtggacacatcttcttaccatcattt
gtcatgcgtactcatggagccaaacaacaacgtgaagctgttaagagggccccaaagcaa
caattagctccagtttttgaggccttagacactcttggaagtactaaatggagaataaat
gtaaagatactcagtgttgtagatagaatatggaccagtggagggcgccttgctgatcta
gtggatcgggatgatgttccattcccagaaaaacctgactctgaggatgaagtgctgcta
agaaagtggaaatggaaagtcaaatccgtgaagaaagaaaatatggagaggcattcacaa
cgttgtgacatagagcttaaacttgctgtagcaggcaaaatgaaggatgaggaaggtttt
tactatccacataacatagactttcgaggccgtgcatatcctatgcatccgtacttgaat
catcttggttcagatctttgccgaggtatattggagtttgcagaaggtcgcccactcagg
aagtctggcctaggttggttgaagattcacttggcaaatctttttgctgggggtgtggat
aaattatctcatgatggtcgaatgacatttattgagaatcatttagaagatatttttgac
tctgctgatagaccacttgaaggaagacggtggtggttgaatgcggaggatccatttcag
tttttagccgcatgcatgaatcttactgaagctttgagaagctcttctcccgaaacattt
atttcgcatattccaatacaccaggatggttcttgcaatgggttgcaacactatgctgct
cttggacgtgacaagttaggagcagcagctgtcaatctggttgccggagagaagcctgcg
gatgtttacttgggaatagctgctagggttctggaaatcatgcgaagagatgcacaaaaa
gatccagcaacttttccagatgcattgcgtgcaaaaacattaatagatcaggtggacagg
aaattggtgaagcaaacagtgatgacatcggtttatggtgtcacctatattggtgctcgt
gatcagataaaaaggaggctgaaggaacgtgctgccatatctgatgattcagatctcttt
ggctgttcttgctatgctgccaagacgacgatgacggcattaggggaaatgtttgaagca
gctcgtgggatcatgaattggcttggagactgtgcaaaaattattgcctcggaaaatcaa
cctgtgcgatggactacacccattggactacctgttgtgcaaccataccgcaaattggga
gaacatcatatcaaaacttctctccaagtcttgacactacgacgagaaacagacaaggtc
ttgacaaggagacagcggacagcattcccaccaaattttgttcactctcttgatggttct
catatgatgatgactgcagttgcctgcaaaaaggcaggtttgaattttgcaggggtccat
gattcatactggacacatgcttgcgatgtggatgaaatgaatagaatacttagagagaag
tttgttgaactttatgagactccaatactggaaaatttattagagggctttcagcgatct
tttcctggattggtctttcctcctctacccgaactgggagaattcgacctaaaggaagtt
ctggagtcaccttacttcttcaactga
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