Benincasa hispida (wax gourd): 120079788
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Entry
120079788 CDS
T07258
Name
(RefSeq) autophagy-related protein 18b isoform X1
KO
K17908
autophagy-related protein 18
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
120079788
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bhj04131
]
120079788
03029 Mitochondrial biogenesis [BR:
bhj03029
]
120079788
Membrane trafficking [BR:
bhj04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
120079788
Mitochondrial biogenesis [BR:
bhj03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
120079788
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
WD40_CDC20-Fz
Beta-prop_Vps41
BCAS3_WD40
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
120079788
NCBI-ProteinID:
XP_038890102
LinkDB
All DBs
Position
6:complement(40845445..40857574)
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AA seq
371 aa
AA seq
DB search
MANQPSSYPILCASFNQDASLFAIGTRDGFRIFDSNNGRLCYERALGAFNIVEMLFSSNL
VAIVGAGEQPSLSPRRLCLFNTMSGNALRELNFLTSILAVRMNRKRLVVLLQDKTYIYDI
NSLTILDRIDTVPNSKGTCAFSPSLDGCFLAIPASITKGSLLLYNVMELQLHCEIDAHRA
PLATMVLSSNGMYIATASEQGTMIRVHLVSEATKQSYSFRRGSYPSTIFSLSFGPCSQVP
EILVATSSSGSVHVFPLGFAINQRSSRRSGGFLGSIMPDSISDKLDPAHHHIVHNAIPAG
IKSYAVIRKVDRVSDTSSSETVACRATLAIITYNGYFQEYTLSLNDQNEFSRSLDHEFNL
MTTITDNDVRL
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatcaaccgtcttcttacccaattctatgcgcctccttcaatcaggacgctagt
ttatttgcaataggcacgagagatggtttccgaatatttgattccaataatggaaggcta
tgctatgaacgtgctcttggtgcattcaatattgttgagatgctatttagctctaatctt
gttgccattgttggagctggcgaacagccatctttatccccacgtcgtctttgcttgttt
aatacaatgagtggaaatgctcttagagaactgaattttttaacttcaatactagctgtt
cgcatgaataggaaaagacttgttgtactactgcaagataagacatacatatacgacata
aatagtctcacaatcttggacaggattgatacagtaccaaattcaaaaggaacctgtgca
ttctcccctagtttggacggttgcttcttagctattccagccagcatcacgaagggatct
ctgttgctgtacaatgtcatggagcttcagttgcactgcgagatagatgctcatcgtgca
ccgctggccacaatggtcctttcttcaaatgggatgtacatagcaacagcatcagaacaa
ggaactatgattagagtgcatctggtatcagaagcaactaagcagtcatatagtttccgc
agaggatcatatccatcaactatattttccttgtcttttgggccatgttctcaagttcca
gaaattctggtggcaactagttcctctggttctgttcatgtttttcctcttggatttgct
ataaaccaaagaagcagcagaagatcaggtggctttcttggatcgataatgcctgactca
ataagtgataaactagatccagcgcatcatcacatagttcataatgctataccagcagga
atcaaaagctatgcagtgatacgtaaggtcgacagggtttctgacacttcaagttctgaa
actgtagcttgcagggccacattagcaatcataacctacaatggttacttccaggagtac
accttaagtctcaatgaccagaacgagttctcgagaagtctggaccatgaattcaatctt
atgaccacaatcaccgacaacgacgttaggttatga
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