Benincasa hispida (wax gourd): 120079923
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Entry
120079923 CDS
T07258
Name
(RefSeq) protein RAE1
KO
K14298
mRNA export factor
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120079923
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhj03019
]
120079923
03036 Chromosome and associated proteins [BR:
bhj03036
]
120079923
Messenger RNA biogenesis [BR:
bhj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120079923
Chromosome and associated proteins [BR:
bhj03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
120079923
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_DCAF12
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
120079923
NCBI-ProteinID:
XP_038890307
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All DBs
Position
6:4784621..4793364
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AA seq
344 aa
AA seq
DB search
MSAFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVASTP
KASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLAGGQAMTVAMHEAPVKEVAWIPE
MSLLVSGSWDKTLKYWDTRQPNPVHTQQLPDRCYSMSVRHPLMVVGTADRNLIVFNLQTP
QSEYKRIVSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDESMANKNFTFKCHRDGSE
IYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMSRCSQPISCSTFNQDGSIFAY
SVCYDWSKGAENHNPATAKTYIYLHLPQEVEVKGKPRVGGGGRK
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcatttgcgaaccccaatcctaataaatcctttgaggttgctcagcctcccagt
gattctgtgtcgagccttagttttagtccaaaggccaatcacttggttgcgacttcatgg
gataatcaggttcgttgttgggagataatgcaaaatgcaggtaatgttgccagtacgcct
aaggcttctatatcccacgatcaaccggttctatgctctgcatggaaggacgatggaacg
actgtattttctggaggctgcgacaaacaagttaaaatgtggcccctattggccggtggt
caagccatgactgtagccatgcatgaagcacccgtcaaagaagttgcatggatccccgag
atgagcctattggtctctggaagttgggacaagacattaaagtattgggatacaaggcag
ccaaacccagtacatacacaacaacttcctgatcgctgttattcaatgtcagtgagacat
ccactaatggtagttggtactgcggatagaaatctcatagtatttaacttgcaaactcct
cagagtgaatataagagaattgtttcacccttgaagtatcaaacaagatgtgtagctgcc
tttcctgatcagcaaggttttttggttggttcaatagagggaagggttggtgtccatcac
cttgatgagtctatggcaaataagaatttcactttcaagtgccacagggatgggtctgag
atttattctgtcaattccttgaacttccatcctgtgcatcacacttttgcgactgcaggg
tcggatggtgcttttaatttctgggacaaggatagcaaacagaggctgaaggccatgtca
cggtgtagtcagcccataagttgtagcactttcaaccaggatgggtcgatatttgcatat
tcagtgtgctacgattggagtaaaggggcagaaaatcacaacccagcaacagcaaagact
tacatttacttgcaccttccgcaggaggtcgaggttaaaggcaagcctcgagttgggggc
ggcggaagaaagtag
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integrated database retrieval system