KEGG   Benincasa hispida (wax gourd): 120079923
Entry
120079923         CDS       T07258                                 
Name
(RefSeq) protein RAE1
  KO
K14298  mRNA export factor
Organism
bhj  Benincasa hispida (wax gourd)
Pathway
bhj03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:bhj00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    120079923
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bhj03019]
    120079923
   03036 Chromosome and associated proteins [BR:bhj03036]
    120079923
Messenger RNA biogenesis [BR:bhj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     120079923
Chromosome and associated proteins [BR:bhj03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    120079923
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR3_2nd WDR55 WD40_Gbeta Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_C ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_Aladin Beta-prop_SPT8 Beta-prop_ACSF4 Beta-prop_HPS5 Beta-prop_DCAF12 WD40_MABP1-WDR62_1st Beta-prop_WDR41 Beta-prop_EIPR1 Beta-prop_IFT122_1st Beta-prop_WDR19_1st Beta-prop_IFT140_1st WD40_RFWD3 Beta-prop_RSE1_2nd Beta-prop_SCAP
Other DBs
NCBI-GeneID: 120079923
NCBI-ProteinID: XP_038890307
LinkDB
Position
6:4784621..4793364
AA seq 344 aa
MSAFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVASTP
KASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLAGGQAMTVAMHEAPVKEVAWIPE
MSLLVSGSWDKTLKYWDTRQPNPVHTQQLPDRCYSMSVRHPLMVVGTADRNLIVFNLQTP
QSEYKRIVSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDESMANKNFTFKCHRDGSE
IYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMSRCSQPISCSTFNQDGSIFAY
SVCYDWSKGAENHNPATAKTYIYLHLPQEVEVKGKPRVGGGGRK
NT seq 1035 nt   +upstreamnt  +downstreamnt
atgtctgcatttgcgaaccccaatcctaataaatcctttgaggttgctcagcctcccagt
gattctgtgtcgagccttagttttagtccaaaggccaatcacttggttgcgacttcatgg
gataatcaggttcgttgttgggagataatgcaaaatgcaggtaatgttgccagtacgcct
aaggcttctatatcccacgatcaaccggttctatgctctgcatggaaggacgatggaacg
actgtattttctggaggctgcgacaaacaagttaaaatgtggcccctattggccggtggt
caagccatgactgtagccatgcatgaagcacccgtcaaagaagttgcatggatccccgag
atgagcctattggtctctggaagttgggacaagacattaaagtattgggatacaaggcag
ccaaacccagtacatacacaacaacttcctgatcgctgttattcaatgtcagtgagacat
ccactaatggtagttggtactgcggatagaaatctcatagtatttaacttgcaaactcct
cagagtgaatataagagaattgtttcacccttgaagtatcaaacaagatgtgtagctgcc
tttcctgatcagcaaggttttttggttggttcaatagagggaagggttggtgtccatcac
cttgatgagtctatggcaaataagaatttcactttcaagtgccacagggatgggtctgag
atttattctgtcaattccttgaacttccatcctgtgcatcacacttttgcgactgcaggg
tcggatggtgcttttaatttctgggacaaggatagcaaacagaggctgaaggccatgtca
cggtgtagtcagcccataagttgtagcactttcaaccaggatgggtcgatatttgcatat
tcagtgtgctacgattggagtaaaggggcagaaaatcacaacccagcaacagcaaagact
tacatttacttgcaccttccgcaggaggtcgaggttaaaggcaagcctcgagttgggggc
ggcggaagaaagtag

DBGET integrated database retrieval system