Benincasa hispida (wax gourd): 120079965
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Entry
120079965 CDS
T07258
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 4 isoform X1
KO
K18999
RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:
3.1.3.16
]
Organism
bhj
Benincasa hispida (wax gourd)
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bhj01009
]
120079965
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhj03021
]
120079965
Enzymes [BR:
bhj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
120079965
Protein phosphatases and associated proteins [BR:
bhj01009
]
HAD phosphatases
Fcp/Scp phosphatases
120079965
Transcription machinery [BR:
bhj03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
120079965
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NIF
BRCT
PTCB-BRCT
BRCT_2
TmcA_N
Motif
Other DBs
NCBI-GeneID:
120079965
NCBI-ProteinID:
XP_038890381
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Position
6:811523..822436
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AA seq
447 aa
AA seq
DB search
MSLATNSPAHSSSSDDFAAFLDVALDSHSSDSSPYEKAEGDNNAESERIKRRKVEKLENS
EEDILYGVEEQSSEAISKQQLCSHPGSFGNMCIICGQRLDEESGVTFGYIHKGLRLNNDE
INRLRNIDMKSLLLHKKLILVLDLDHTLLNSTQLGHLTPEEEYLRSQTDSLDDVTKGSLF
LLNSVHTMTKLRPFVHSFLKEANQLFEMYIYTMGERAYAFEMAKLLDPKKEYFNGKVISR
DDGTQKHQKGLDVVLGQESAVLILDDTENAWPKHKKNLILMERYHFFASSCHQFGFNCKS
LSELKSDESETDGALATILKVLKQVHSVFFNELSDDLVDRDVRQILKTVRSKVLEGCKVV
FSRVFPTKFQADNHHLWKMVEQLGGTCSTELDQSVTHVVSMDAGTEKSRWALKEEKFLVH
PRWIEASNYFWKRQSEENFPVEQTKKQ
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgagccttgcaactaattctccagctcactcatcaagcagtgatgattttgctgcgttt
cttgatgtagctctagattcccattcgtctgattcatcaccctatgaaaaggccgagggt
gacaataatgccgaaagtgagaggataaagcgccgtaaggtggagaaactggaaaactca
gaggaggatattctgtatggagttgaagagcaaagttcagaagcaatatcaaagcaacaa
ttatgcagtcatcctggttcatttggaaatatgtgtatcatatgtgggcaaaggttggat
gaggaatctggcgtgacatttgggtatatacataagggactcagactaaataatgatgaa
attaatcggctgcgtaacatagacatgaagagcttattgctgcataaaaagcttatcctg
gttcttgatctggatcacacactattaaactcaactcaactagggcatttgacacctgaa
gaggagtatttaaggagtcaaacagattctctagatgatgtcacgaaaggaagccttttc
ctattgaactctgttcatacaatgacaaaattgaggccatttgtccattcatttttgaaa
gaagctaatcaactgttcgaaatgtatatatacactatgggggagcgagcatatgccttc
gaaatggcaaagttgctggaccccaagaaggagtactttaatggaaaagttatttctcgg
gatgatggcactcaaaagcatcaaaaaggtcttgatgtggtgctgggtcaggaaagtgct
gttctgatcctcgatgatactgaaaatgcatggccaaaacataaaaaaaacttgatattg
atggagagatatcacttttttgcttcaagttgtcaccaatttggcttcaattgtaaatct
ctatctgagttgaagagtgacgagagtgaaactgatggggcactggcaaccatcctgaaa
gttctgaagcaagtccatagtgtattctttaacgaattatcggatgatttggttgacaga
gatgtgaggcagatactgaagacagttcggagcaaagttctcgagggatgcaaagtcgtc
ttcagccgggtctttcctaccaaatttcaggctgataaccatcacctatggaagatggta
gagcagttgggaggcacttgctcgaccgaactcgaccaatctgtgacacatgtggtctca
atggatgctggaacggagaagtcacgttgggctttgaaagaggagaagtttctggtccat
ccacggtggatagaagcatcgaactacttctggaaacggcaatcggaagaaaactttccc
gttgagcaaaccaagaaacaatga
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