Benincasa hispida (wax gourd): 120080099
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Entry
120080099 CDS
T07258
Name
(RefSeq) U3 snoRNP-associated protein-like EMB2271
KO
K14793
ribosomal RNA-processing protein 9
Organism
bhj
Benincasa hispida (wax gourd)
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bhj03009
]
120080099
Ribosome biogenesis [BR:
bhj03009
]
Eukaryotic type
90S particles
Other 90S particles
120080099
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_EML
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_DCAF12
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
120080099
NCBI-ProteinID:
XP_038890586
LinkDB
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Position
6:complement(3325014..3332541)
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AA seq
505 aa
AA seq
DB search
MTKKKSLAPPKGAKKGKNFPLSKDPFFSSESRKRRKIVDDEIESGESDEDNGLVGVEDEE
FEEETVDEKRKRVAIEYLEKIREIAKKEKEREDEEKDEDETGDEGEKDSLVAQILQQEQL
EDSGRLRREIASKVQKPVAKDGFQFLIKHRQSVTAVALSEDDLKGFSSSKDGTILHWDVD
SGKGEKYHWPSDEILRSHGAKDPQGRATKHSKVTLSLAVSSDGRYLASGGLDRHVHIWDT
RSREHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAYINTLFGHQSDVLT
IDCLRKERLLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGSDDGSIEL
WTVLKKKPIFIVRNAHSSSSSSTNLELKENGTIPNGCMGNGDVNHNTSHSLSAYSWVSSV
SVCRNSDLAASGAGNGSVRLWALTSDKKDVRPLYDLPLVGFLNSLTFAKSGRFVVAGVGQ
EPRLGRWGRIPAAQNGVAVHPLKLS
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagaagaaaagcttggcccctcctaaaggggcaaagaaggggaagaattttcca
ctcagtaaggatcctttcttcagttctgaatcaaggaaacgaaggaagattgttgatgac
gagattgagagtggtgagtcagacgaggataatgggttagtgggcgtcgaggacgaggag
tttgaggaagaaactgttgatgagaaaagaaagagagtagcaatcgagtacttggagaaa
attcgggaaattgcgaaaaaagaaaaggagagggaggatgaagagaaggatgaggatgag
actggtgatgaaggcgaaaaagattcacttgttgcacaaattcttcagcaagagcaactt
gaagatagcggaaggcttcggagagaaattgcatcgaaggtccagaagccagtagctaaa
gatggatttcaattcttgattaagcacagacaatctgttacagctgtggctctatccgag
gatgatttgaaggggttttcatcgtccaaggatggtaccatcttacattgggatgtagac
agtggtaaaggggaaaaatatcactggcctagtgatgaaatattgagatcgcatggtgct
aaggatccccaaggccgggctacaaagcatagtaaagtcactttgtcattagctgtcagt
tctgatggtcgatatttggcaagtggaggcttagaccgccatgtgcatatatgggatact
cgttcaagagagcatattcaggcatttcctggtcatagaggacctgtttcgtgtttgact
ttcaggcaagggacttcagaacttttttctggttcatatgatcgaactgtgaagatatgg
aatgtggatgacagggcttatataaatacattgtttggtcatcaaagtgacgtattgact
atcgattgtctacggaaagaaaggttacttaccgttggacgtgatcggagtatgcaatta
tggaaggttccagaggagtcccgtttagtatttcgtgctcctgcatcatccttagaatgt
tgctgttttataagcaatgatgaattcttatctggatcagatgacggcagtattgagctc
tggactgtattaaaaaagaagcctatttttattgtacgaaatgctcattcttcttcatca
tcttccacgaacttggaactaaaggaaaatggaaccatccccaatggttgtatgggaaat
ggggatgtcaatcataatacctctcacagtttgtcagcatactcttgggtaagctcagtc
tcagtatgtagaaacagtgaccttgctgcatcgggtgctggaaacggttctgttcgttta
tgggctctcacaagtgataagaaagatgttcgaccattatatgacctccctctggttgga
tttttgaactccttgacttttgccaaatctggaaggtttgtggtggctggagttgggcag
gaacctcgtttaggaaggtgggggcgaatcccagctgctcagaatggagttgcagttcac
ccccttaagctctcatga
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