Benincasa hispida (wax gourd): 120080216
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Entry
120080216 CDS
T07258
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj00040
Pentose and glucuronate interconversions
bhj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120080216
Enzymes [BR:
bhj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
120080216
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
120080216
NCBI-ProteinID:
XP_038890725
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Position
6:13374485..13378504
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AA seq
415 aa
AA seq
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MAASSSLSFLFLLLSLSFFFTMSVSTTTSNSSLHSVHQHPHLVVQDVQRSINASRRNLGY
FSCGTGNPIDDCWRCDSNWATNRKRLADCAIGFGKNAIGGKNGRFYVVTDAGDDDPVNPR
PGTLRHAVIQNEPLWIIFKRDMVIQLTQELVMNSFKTIDGRGASVHVAGGPCIKIHYATN
IIIHGIHIHDCKRGGNANIRDSPQHSGWWTASDGDGVSILGGREIWIDHCSLSNCNDGLI
DAIHGSTAITISNNYMTHHDKVMLLGHSDSYAQDKNMQVTIAFNHFGEGLVQRMPRCRHG
YFHVVNNDYTHWEMYAIGGSASPTIYSQGNRFAAPYNRFRKEVTKHEDAPESEWRHWNWR
SEGDMMLNGAYFRQSGAGAASSYARANSLSARPSSLVSSITVTAGALNCRKGSRC
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttcttcttctctttcctttctctttcttcttttatctctttctttcttcttc
actatgtctgtttcaacaacaacttccaattcctccttgcattctgttcatcaacatccg
catcttgtcgttcaagatgttcaaaggagcataaatgcatcaaggagaaacttgggatat
ttctcttgcggaacgggaaacccaatagacgattgctggagatgcgattccaattgggca
accaatcgtaaacgcttagccgattgcgccatcggcttcggcaaaaacgccatcggagga
aaaaacggccgtttctacgttgtcacggacgccggcgacgacgaccctgtcaacccacgc
cccggcactctccggcacgccgtcattcaaaacgaacccttgtggatcattttcaaacgt
gacatggtaatccaactcacccaagaactcgtaatgaactcgttcaaaacaatcgacgga
cgtggggccagcgtccatgtggcaggtgggccatgtataaaaatccattacgccacaaat
attataatccacggcattcatattcacgattgtaagagagggggaaacgctaatatacgg
gactccccacagcattctgggtggtggactgcatcggacggtgatggagtgtcaatatta
ggaggaagagaaatctggatcgatcattgctctctgtctaattgtaatgatgggttgatt
gatgcgattcatgggtccactgctattactatatccaataattatatgacacatcatgat
aaggtgatgttgttgggacatagtgattcttatgcacaagataaaaatatgcaagttact
attgcttttaaccattttggtgaaggacttgttcagcgaatgccaagatgtagacatggt
tatttccatgtcgtgaacaacgattacacccactgggaaatgtacgccatcggagggagt
gcttcgccaacgatatacagccaagggaacagatttgcagcgccctacaatcgcttccga
aaggaggtaacaaagcacgaggacgcgccggagagcgagtggcgccactggaattggcgc
tccgagggcgacatgatgttgaacggcgcttatttccgccagtccggcgccggtgccgcc
tccagctatgcacgagctaacagcctcagcgcgagaccctcctctcttgttagctctatc
accgttaccgccggcgccctcaactgccgcaagggctctcgctgctag
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