Benincasa hispida (wax gourd): 120080231
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Entry
120080231 CDS
T07258
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH17
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
bhj
Benincasa hispida (wax gourd)
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bhj03036
]
120080231
Enzymes [BR:
bhj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
120080231
Chromosome and associated proteins [BR:
bhj03036
]
Eukaryotic type
Meiosis-specific proteins
Others
120080231
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
Helicase_C
ResIII
HHH_5
Cdd1
IMS_HHH_1
DNA_pol_lambd_f
AAA_22
HHH
TfoX_C
SE
Motif
Other DBs
NCBI-GeneID:
120080231
NCBI-ProteinID:
XP_038890739
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All DBs
Position
6:complement(12186971..12196762)
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AA seq
1161 aa
AA seq
DB search
MDSYSLKSVSDLPAPLRSTFSFRYFNSLQSECFPVCFNSDTNMVISAPTGSGKTVLFELC
ILRLLSNFIAEGKFVHVKGTLKSIYIAPSKALVQEKVRDWNQKFGSWGVSCLELTGDNET
YNVKNIQEADIIVTTPEKFDAVTHYRIKDGGLGFFSDIALVLIDEVHFLNDPRGAVLEAI
VSRIKMIARNPEMKSSPLSRVRFLAVSATIPNIGDLAEWLSVPVQGVKRFGEEMRPIKLT
SKVFGYAPAKNDFMFEKRLQNYIFDVLMQYSRGKSALVFCSTRKGAQEAAQRLSQTAMTF
GYSNPFIKSKEQLERLREASLSCSDKQMQSNILYGVGYHNGGLCLKDRNLIESLFLKGDI
QVICTTNTLAHGINLPAHTVIIKSTQHFNKEKGLYMEYDRSTILQMCGRAGRPPFDDTGI
VIIMTRRDTVHLYENLLNGCEIVESQLLSCVTEHLNAEIVQMTIPDIIKAIEWMKCSYLY
VRMKKNPQKYAIRNGIPNHNTEKHMEDICIEKVNELSRHQMIWMDEDGFLLKPLDPGRLM
TKYYLKFDTMKHIMHAPEICSLEEALHIICHAEEIAWIQLRRNEKKLLNDVNNDKDGRLR
FHILGENGKKKKRIQTREEKIFILANDCLTGDPLIHDLSLSQDMNSICSNGCRIAKCMKE
YFVYRKNYEGTFNSMLLAKSLYQKLWDDSPYLLKQLPGIGMVTAKALHSMGIKSFEELAE
ADPRKIEIVTGRKYPFGNHIKESLSSLPPEVDLKLEEAECPRQAKAKLIVTLTRLPQSYR
PNKRHYAEMIVGSEEDNQILFHEKIRVDEFSSPYSAVVLVSYPQQGKLTIKADLIFDEYI
GIDLHRKVQLMERNLNAKNKWGRMPLSSHPPEEVYVIDDDSEPLPQAATEELPISGNSNA
LLDSMPSFNLLDEDLEEAKPATGNDEDECKIITERTVFDHIREKAKSFPVLAASKSSAHS
PAPVTYSLTNNKQPLELQVEALEVTQRNELSPHANVDSFSAFRKELRNNEYLTLQSHITS
KRHFMDVDKGDFGLQTEGSKIIVTEETIFDHIKRKANSFPVVHQNSENTKAGGGDRYSKL
NQASSRDSSGPMESMPMVCFDISMLKENKRPRPESPNISTNWKKQQSPSVESRQNLCSLE
TATESREVDPFVGFKSVFSFL
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atggactcatattcactgaaatccgtgtcagatttacccgcaccacttcggtcgactttt
agtttcaggtacttcaattcattgcagagtgaatgtttccctgtttgtttcaactccgat
acaaacatggtcatttcagcacctactgggagtggtaaaactgtactgtttgagctttgc
attttgaggcttctttcaaattttattgccgaagggaagttcgtccatgtaaagggaact
ctaaaaagcatatatattgccccatctaaggccttagtacaggagaaggtccgtgattgg
aatcagaaattcgggtcttggggggtcagctgtttggagctaacaggagataatgaaact
tacaacgtgaagaatatacaagaagctgacattattgtaacaacgcctgagaaatttgat
gcagtgactcactatcgcataaaggatggtggtttgggcttcttcagtgacatagctctt
gtacttattgatgaagttcattttttgaatgacccacgtggagcggtgttggaagctata
gttagtagaattaaaatgattgctcgcaaccccgaaatgaaatccagtcctctctcacgt
gttcgcttcttagctgtatctgccacaatcccaaatattggggatcttgcggaatggctt
agcgtccctgttcaaggagttaaaaggtttggagaggaaatgaggcctataaagttaacc
agcaaagttttcggctatgcccctgctaaaaatgatttcatgtttgagaagcgccttcag
aactacatttttgatgttctcatgcaatattcaagaggaaaatctgcattagtgttttgt
tcaactagaaaaggagcgcaagaagcagctcaacggctctcacaaacagcaatgaccttc
ggttattcaaatccatttatcaaaagcaaggaacagctggaaagattacgagaagcttca
ctatcatgcagtgataagcaaatgcaatctaatattctttatggtgttggctatcacaat
ggtggactttgcttgaaggatcgcaatctcattgaaagtctttttctcaagggtgatatt
caagttatttgcactacaaatactcttgctcatggaattaacttgccggcacatacagtc
ataataaaatcaacacagcactttaacaaggagaagggcctttacatggaatatgatcgg
tccaccatactacagatgtgtgggagggcaggtcggcctccatttgatgacacaggaatt
gtcataatcatgacaagaagagacactgtccatttgtatgagaatctcctgaatggatgt
gaaattgtggaatcgcaattgctgtcatgtgtgacggagcatttaaatgcggagatagtt
caaatgaccatcccagatataataaaagcaattgaatggatgaagtgttcgtatttgtat
gtaagaatgaaaaagaatccgcagaaatatgctataagaaatggaattcctaatcataat
acggagaagcacatggaagacatttgcattgagaaagtaaatgaattatctcgacatcaa
atgatttggatggatgaagatggcttcctcttgaagccactagatcccgggaggttgatg
actaaatactatttgaagtttgataccatgaaacacattatgcatgcccctgaaatttgt
agtctagaggaggcgctacatatcatctgccatgccgaggaaattgcttggatccagctt
aggcgcaatgagaagaagcttctaaatgatgtaaacaatgataaagatgggaggctgcgt
tttcacattcttggtgaaaatgggaagaagaaaaagcgtatacagacgagagaagagaaa
atatttattttagcaaatgattgcttgaccggtgaccctttaattcacgatttatccctc
agtcaggacatgaattctatttgctcaaatggatgcagaattgccaaatgcatgaaagaa
tattttgtatacagaaagaactacgaaggaacattcaactcaatgcttcttgcaaaatct
ttatatcagaaactctgggatgacagtccctatttactcaaacaattacctggcatcgga
atggtgactgcgaaggcgttgcattctatgggaataaaatcatttgaggaacttgctgaa
gctgatccaaggaaaatagagatagtcactggcagaaaatacccatttgggaatcatatc
aaggagtcattatcatctttaccaccggaagtggatctgaagctcgaggaagctgaatgc
cctaggcaagcgaaggccaagctcatagtaacattaactagattgccccagtcttaccga
ccaaataaacgacattacgctgaaatgattgttggctcagaagaagataaccagatcctc
tttcatgagaaaataagggtcgatgaattctccagcccctacagtgcagttgttcttgtc
tcatatccacaacaaggaaagttgacgatcaaagccgatcttatttttgatgaatacatt
ggcattgatctccaccgaaaagttcaactaatggaacgaaatttaaacgcgaaaaacaaa
tggggaagaatgccattatcctctcatccacctgaggaagtatatgtcattgacgacgac
agtgaacctctaccacaagctgcaacggaagagctgcccatatctggcaactcaaacgca
ttacttgattccatgccgagtttcaacctcttagacgaagacttggaggaagccaagcct
gcaactggcaacgacgaagatgaatgcaaaatcatcactgaaagaactgtatttgaccac
atacgtgagaaagctaaaagctttcctgtgttggctgcatcaaaaagtagcgctcattca
cctgcaccagtgacatatagtctaactaacaataagcagccgctagaactccaggttgaa
gcattggaagtgacacagagaaatgaactttctcctcatgccaatgtggattcgttttca
gcattcagaaaggaactacgaaataatgaatatctgaccctacaaagccacatcacttct
aaacgacatttcatggatgttgataaaggggacttcggtcttcagacagaaggaagcaaa
ataattgtaaccgaggaaaccatattcgatcatattaaacgaaaagccaacagttttcca
gtagtacaccaaaattctgaaaatacaaaggcaggaggaggagatagatacagcaaattg
aatcaggcttcttcaagagattcaagtggtccaatggaatccatgccaatggtgtgtttt
gatatctccatgttgaaggaaaacaagcggccacgcccagagagccctaatatcagtacc
aactggaagaagcagcagagcccatctgtagaaagcagacagaatttgtgctccttagaa
actgccacggaaagcagggaagttgatccttttgttggatttaagagtgtcttttcattc
ctttga
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