KEGG   Benincasa hispida (wax gourd): 120080241
Entry
120080241         CDS       T07258                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit 4-like
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
bhj  Benincasa hispida (wax gourd)
Pathway
bhj03020  RNA polymerase
bhj03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bhj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    120080241
  09124 Replication and repair
   03420 Nucleotide excision repair
    120080241
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bhj03021]
    120080241
   03400 DNA repair and recombination proteins [BR:bhj03400]
    120080241
Transcription machinery [BR:bhj03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     120080241
DNA repair and recombination proteins [BR:bhj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      120080241
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 120080241
NCBI-ProteinID: XP_038890773
LinkDB
Position
6:complement(1926043..1929863)
AA seq 138 aa
MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQRAEDPTNQVSQVFEKSLQ
YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAISVVPSLKTKGRVHD
DEAIEKMLNDLSLIKKFE
NT seq 417 nt   +upstreamnt  +downstreamnt
atgtctggagaagaggaagaaaatgctgcagagcttaaaattggggatgaattcttaaaa
gctaagtgtttaatgaattgtgaagtttctttgatccttgaacacaagtacgagcaactt
caacaaagggctgaggatccaacgaatcaagtttctcaagtatttgaaaagtcattacag
tatgtgaaacgcttcagtcgctataagaacccggatgctgttagacaagtccgagaaatt
ctaagcagatatcaactagctgagttcgagctatgtgttcttggtaacctttgccctgaa
actgtggaggaagctatttccgtagttccatctttgaagactaaaggaagggtacatgac
gacgaagcaatagagaagatgttgaatgatctttcattaatcaaaaagtttgagtag

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