Benincasa hispida (wax gourd): 120080326
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Entry
120080326 CDS
T07258
Name
(RefSeq) putative CCR4-associated factor 1 homolog 8
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120080326
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhj03019
]
120080326
Messenger RNA biogenesis [BR:
bhj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120080326
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
120080326
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
120080326
NCBI-ProteinID:
XP_038890896
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All DBs
Position
1:complement(93563978..93569757)
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AA seq
202 aa
AA seq
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MEFTFSDFDEETVIVIDIEFPGFIRSTSRGALEEHLYQDLKFNVNHLKILPLGLTLADGN
GNVGITWEFTFSDFDEETGLSNPTSIRFLKNKGFDFKKQREEEIRAAEFQLLMVIKFMPK
SVVEFTIVTRCFLGTINDLKYIIRNCKYLLNGKLGLKKLAKLLNIVNDITTHHLADFDSL
LIASAYAKMKKMYEFSSKNLDG
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atggagttcactttttctgattttgacgaagaaacagtgatcgtcattgacatcgagttc
cctggctttatccgatccacctcgagaggtgctcttgaggaacatctctaccaagatttg
aagttcaacgtaaaccatttgaagattcttccattgggccttactctagccgacgggaat
ggaaatgttggcataacatgggagttcactttttctgattttgacgaagaaacaggtctc
tccaatcctacatcgatccgattcttgaagaacaaagggtttgatttcaagaaacaaaga
gaagaagaaatccgagcagctgaatttcaactcctaatggtgatcaaattcatgccgaag
tctgtagtggagttcaccatcgtaactcgatgtttccttggtacgatcaacgacctaaag
tacattattcgtaattgcaaatacttactaaatggcaaacttggacttaaaaaacttgct
aagttactcaatattgtgaatgacattactacccatcatcttgctgattttgatagtttg
ttgatagcttctgcatatgcgaagatgaagaagatgtacgagttttcatcgaaaaatctc
gatgggtaa
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