Benincasa hispida (wax gourd): 120080397
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Entry
120080397 CDS
T07258
Name
(RefSeq) sister chromatid cohesion 1 protein 4 isoform X1
KO
K06670
cohesin complex subunit SCC1
Organism
bhj
Benincasa hispida (wax gourd)
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bhj03036
]
120080397
Chromosome and associated proteins [BR:
bhj03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
120080397
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
CENP-B_dimeris
CNDH2_N
Motif
Other DBs
NCBI-GeneID:
120080397
NCBI-ProteinID:
XP_038890976
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Position
6:32308752..32322125
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AA seq
1184 aa
AA seq
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MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL
LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE
LPDNEIYQGNYVDHHVSSREQITLQDTMEGVVYTTSQFGLDERFGDGDASQIGLDLDEEL
FVEKITVKDHDEIPDNDPPTPSQLTVLKDKDENMEEDLEAFEMVQDPTSTTGQVDECNLS
NVQDCDVSLKMEDHGTDLEAVGTENNESRKSDIYGGTTDVLDWSSPNDLDYDTTRSILPE
ENGHLSSDPENKDGKLEQFSLPSGETMEKIKGDALGGSSTGEEMNNGVVINNEPEMTFLD
HVDAEYDRSRSTLDATAMSPSRSGVTPDLEDLGHKVPSDGTYALASEGVLIGDQLTLKPM
DNLVEVLSPGKVAPDTTYQEESPGRPEVIDAESKEFQEPKDTETQNSFNGEEITSIEKSL
LQPCNSHAIEPDRSSLEGESYQGTDAVTQNLDTSEKTGTEVSEDGQAGCRDSDKPLNCAL
PNDICTEISNRSPTSDFPAPEKFLSVPEGLTETHVDDLPLDSSLEKGNLAEDDGGVSGTN
LMSGKKRSFTESTLTAQSLNSAESVGVHRSKRVTESIPDDDDLLSSILVGRRSSVLKMKP
SPPVHESISLKRTRSTLRVGTSKKKVLMDDTMVLHGDTIRQQLTSTDDIRRVRKKAPCTR
PEISMIQRQFLEDEIFIEPIFSGISKELASLHAEAFDLSEIRVYEKGTVSASTEAGNDFE
SAVRPNTAEESATKTNLEAVVDKNDLESRPAQAATQNETELAQEFTLECPDLDIQEQLQV
TSTENAGQEPIGEMEKIDSEAGNVADAVNSFEIPELELPSLVIGDKYDDPNGSLQMDISC
FSPEKILESQPGVEDTLLVETGNIGLETVNTNDCTEIRDNLDDEKSNHNISLVTSPGENG
ESNYLTPDNGDKPAESILDVKLVGIDADGVNTSDFVCDEKDPAALCLIDGVQMDSHFPSG
FDMDFKSTSFNEVVNPDYPEETDLLNLVDTEMNILDHPMVEDRGDFEDATVANDIEFLNV
DDDEEEDEDNTQFADPSFLENSGWSSRTRAVARYLQNLFDRDSVQGRKVLHMDNLLVNKT
RKEASRMFFETLVLKTKDYLHVEQEKPFDNISIKPRINLMKSSF
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgttctattctcaatttatattggccaagaaagggccgcttgggacaatatggatagcg
gcacatttggagaggaagctgcggaaaaatcaagtggcggacactgatattggggtctca
gttgattcaattcttttccctgatgtgccaattgcactccgattgtccagccatcttctc
cttggagtggtgaggatatattctagaaaggtgaattacctatttgacgattgcagcgaa
gctctgcttaagataaagcaagcattccgttctactgctgttgatttaccccctgaagaa
tctactgctccatatcattctatcactttgcccgagacttttgatcttgatgattttgag
cttccagacaatgaaatttatcagggtaattatgttgatcatcacgttagttctcgagag
caaattacccttcaagatactatggagggtgtagtctacaccacttctcaatttggcttg
gatgagcgatttggtgatggcgatgcttcacaaattggtttagatcttgatgaggaactc
tttgtggagaagatcactgttaaggaccacgatgagattccagataatgatcctccgaca
ccttctcaattgacagtcttgaaagataaggatgaaaatatggaggaagatttagaagcc
tttgaaatggtgcaggatccaacatctactacaggacaagtggatgaatgcaacttgtca
aatgtacaggattgtgatgtttctttgaaaatggaagatcatggtacagacctggaagct
gtgggaactgaaaataatgaatccaggaaatcagatatttatggtggaactactgacgtt
ttagattggtcttcccctaatgatttggattatgatactacaagaagcatacttcctgaa
gagaatggccatctttctagtgacccagaaaacaaagatggaaaacttgaacagttttct
ttgccaagcggcgagacaatggaaaagatcaaaggagatgcattgggtggttcaagcaca
ggagaagaaatgaacaatggagttgtaataaacaatgagcctgaaatgacctttcttgat
cacgttgatgcagaatatgaccgcagcagatctacattggatgcaactgcgatgtctcct
agtcggtctggtgtcacacctgatttggaggacttgggccataaagttccttcagatggc
acgtatgcattagcatcagaaggtgttttgattggtgatcaactaaccttaaaacccatg
gacaacttggttgaagtgctctcacctggaaaagttgctccagatacaacgtaccaagag
gaatctcctggaaggcctgaggttattgatgctgaatctaaggaatttcaggagccaaag
gacactgagactcagaattctttcaatggtgaggaaatcacatccatagagaagtctttg
ctgcagccatgcaattcccatgcgattgaacctgataggtcatctcttgaaggtgaaagc
taccagggaactgatgccgtgacgcaaaatttggatacaagtgagaaaactggtacagaa
gtttctgaagacggacaagctggttgcagggattctgacaaacctttgaattgtgcattg
ccgaatgatatttgcacagagatttctaataggtctcccacctcagacttccctgcacct
gagaagtttctttctgtaccagagggccttactgaaacacatgttgacgacttaccattg
gattcttcattggaaaaaggaaatttggccgaggatgatggaggtgtttctggaactaat
cttatgtcggggaagaagcgaagctttactgaaagtactttaacagcccagagtttgaac
tcagctgagtcagttggggtgcatcgatctaagagggttacagaatccattcctgatgat
gatgatttgttgtcatctattttagttggaagaagatcttcggttttgaaaatgaaaccg
tcacctcctgtgcatgaatcaatatccttgaaacgcacacgatctacactccgagttggc
acctcaaagaagaaggtgcttatggatgatacgatggttttgcatggagacacaatacgt
caacaacttacaagcactgatgacatacgtcgtgttcggaaaaaggcaccttgtactcgt
cctgaaatttcaatgattcagagacaattcttagaagatgaaattttcattgaacccata
ttttcaggtatctccaaggaactggcctcattgcatgcggaagcatttgaccttagtgaa
atcagggtttatgagaagggcacagtcagtgcttctactgaggcaggaaacgattttgaa
tctgctgttaggccaaataccgctgaagaaagtgctacaaaaacaaacctggaagcagtg
gttgacaaaaatgatcttgaatctcggcctgctcaggctgctactcagaatgagactgaa
ttagcccaagagtttacattagagtgtcctgatcttgatattcaagagcagctgcaagtg
acttcaactgagaatgctggacaggaacccattggagagatggaaaaaatagattctgaa
gcaggaaatgttgctgatgcagtcaatagctttgagattccggagttagagttgccatcc
ttagtcattggggataaatatgatgatccaaatggttctttgcagatggatatttcttgc
ttttctccagagaaaattctggaatcgcagcctggtgttgaagatactcttttagtggaa
acagggaatataggtcttgaaactgttaatactaatgattgcactgagatcagagataat
cttgacgatgaaaaatccaatcacaatatttcccttgtaacttcacctggagaaaatggt
gaatccaattatctgactcctgataatggtgacaagcctgctgaaagcatcttagatgtt
aagttagtgggaattgatgcggatggagtaaatacatcagactttgtttgcgatgaaaag
gatccagctgctctttgtttaattgatggagttcagatggattcgcattttccatcggga
tttgatatggattttaaaagtacctccttcaatgaagttgtaaatccagactatcctgaa
gaaactgatttgctcaatcttgtggacacagaaatgaatatcctcgaccatcctatggta
gaagaccgtggtgattttgaggatgcgacagtggcaaatgatatagaatttttgaacgta
gacgatgacgaagaagaagatgaggacaacacgcaatttgcagatcctagctttcttgaa
aacagtggatggtcttcccgcaccagggctgttgccagatatctccaaaatctctttgat
agggactctgtacaagggagaaaggtccttcacatggataacttactcgttaacaaaact
cggaaggaagcatcgagaatgttttttgagacactggttctcaagacaaaggattacctc
catgtagaacaggaaaaaccctttgataacattagtataaagccaagaataaatctcatg
aagtcaagtttctga
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