Benincasa hispida (wax gourd): 120080471
Help
Entry
120080471 CDS
T07258
Name
(RefSeq) uncharacterized protein LOC120080471
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bhj
Benincasa hispida (wax gourd)
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bhj03016
]
120080471
Enzymes [BR:
bhj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
120080471
Transfer RNA biogenesis [BR:
bhj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
120080471
Prokaryotic type
120080471
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
120080471
NCBI-ProteinID:
XP_038891059
LinkDB
All DBs
Position
6:13089404..13094162
Genome browser
AA seq
545 aa
AA seq
DB search
MVKSSALFHASNFFIRSTFMPSSITLTLFLLPSNLNHLHRFAFRNSLSPLSPRRLSTTST
PFPLQYEMIINRPSYPPPPHQNRRTPTRIRSDNSPEFDSSEDPTSEMGFESWVDRKLISE
SETISGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDNKTQDEGFVELKPEVVEFNTLHKRE
EELFFYDAFAYPWEKDKHYKMVYQLEKKYFPDEGLDKAFLGPGESNVEVNEQTKGRKGVK
KGVGVEPEMKVKVTHGMDDKGLVFFDEGKPENENKGSVKDVTEKKVEEFFKCLKKVPAKD
SEIGPTEPYLLTRHTELPAKWDSPCGTVVLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGT
LDPMATGLLIVCVGKATKLVERYQGMIKSYSGVFRLGEATSTWDADSPVIQREPWEHIKD
GDIKKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLD
DRQNLIFRVTCSKGTYIRSLCADLGKVLGSCAHLTALRRDSIGQYLADDAWEFKELEDAI
TKGYF
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaatcatctgctctgtttcatgcttccaatttcttcattcgctctacattcatg
ccttcttccataacactcactctcttccttctaccctcaaacctcaaccatctccacagg
tttgcctttcgcaattcactctctcctttatcgcctcgaagattatccaccacttccacc
cctttccctctgcaatacgaaatgatcatcaaccgaccgtcttatcctccgccgccccat
cagaatcgaagaacacccaccagaatccgctccgacaactctcccgagtttgactcctcc
gaggatcccacttccgaaatggggttcgagagctgggtggatcggaagcttatatccgag
agtgaaactatttctggtaaggaaggcgtggttatggataaggctatgaggaaatactat
aataaaagaaggaagaggatgtatgggtctgattctgatgaagataataagacacaggac
gagggatttgtggaattaaagcctgaggtggtcgagtttaatacgttgcataagagagag
gaggaattgttcttctatgacgcttttgcttatccgtgggagaaagataagcattacaaa
atggtgtatcagttggagaaaaaatattttcctgatgaaggtcttgacaaggcttttttg
ggacctggagagtcaaatgtggaagtgaatgaacagacaaagggaaggaaaggggtgaaa
aagggagttggggttgagcccgaaatgaaagtgaaggtcacccatggcatggatgacaaa
gggttagttttctttgatgaggggaaaccagaaaacgagaacaaagggtcggtgaaagat
gtgacagagaagaaggtggaggagttcttcaagtgtttgaagaaagttcctgctaaagat
tctgagattggtccgacggagccatatcttttgacgaggcatacggagctccctgccaaa
tgggatagtccttgtgggacagtggttttgctgaacaaaccgaaagggtggacttcattt
acggtatgtggaaaacttcggcgcctagtcaaagtgaaaaaggtaggtcatgcaggtact
cttgatcctatggctactggtttgttgatagtgtgtgttggtaaagcgacgaagttggtt
gaaagatatcaaggtatgattaagagctacagtggagttttccgtttaggtgaggctact
tcaacttgggatgctgattcaccggtaattcaacgagagccttgggagcacatcaaagat
ggtgacataaaaaaagctgctgcttctttttgtggggaaatctggcaagttcctcccatg
ttttctgccattaaagtcggaggtgagaagatgtatgagaaagcaagaagaggagaaagt
attgagctttctccaagacgaatatcaatcttcaaatttgatattgaacgtagtttagat
gacaggcaaaatttgatttttcgagtaacatgctctaaaggaacatacattcgatcactt
tgtgcagatcttgggaaggtccttggcagttgtgcccatctaactgcacttcgaagggat
tcaatagggcaatatctagcagatgatgcctgggaattcaaagagttggaagatgcaatt
accaaaggttatttttag
DBGET
integrated database retrieval system
