Benincasa hispida (wax gourd): 120080595
Help
Entry
120080595 CDS
T07258
Name
(RefSeq) DNA mismatch repair protein MSH7
KO
K08737
DNA mismatch repair protein MSH6
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
120080595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bhj03400
]
120080595
DNA repair and recombination proteins [BR:
bhj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
120080595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
RT_RNaseH_2
Motif
Other DBs
NCBI-GeneID:
120080595
NCBI-ProteinID:
XP_038891241
LinkDB
All DBs
Position
6:55827695..55839102
Genome browser
AA seq
1092 aa
AA seq
DB search
MQRQKSLLSFFQKSPSDNRSSDGAASPISQRLTRFPPKPSVAGLEQSAIQTTADPSLEIR
GTDTPPEKVPRQILPAIEKNRGSSLFSSIMHKFVRADDKRKANERDEVQKDFSHNEVRKD
SSQLPSISGKVNDPKEFSKLDIASRHHGKLNDANLNGHRGSVLDIESDDDIAGPETPGMR
SSISRLKRSQEVSFVDGSGDSLQDSTKRIKLLQDSLNKIHNEVSDATSKFEWLNPSQVRD
ANRRRPDHPLYDKKTLYIPPDVLKKMSASQKQYWNVKCQYMDILLFFKVGKFYELYEQDA
EIGHKELDWKMTLSGVGKCRQVGVPESGIDDAIQKLVACGYKVGRVEQLESSDQTKTRGA
NSVIPRKLVQVVTPSTKADGDIGPDAVCLLAIKEESCGLENNSIAYGFAFVDCAALKFWT
GSIKDDASFAALGALLMQVSPKEIIYEARGLSKETQKVLKKYSPTGSTALEFTSGSQVTN
FLETSEVKLLIQSKGYFKGSLNLWNHATESTVHDDIALCALGGLINHMSRLMLDDVLRNG
DLLPYQVYRGCLRMDGQTMVNLEIFRNNDDGGPSGTLYKYLDNCVTSSGKRLLRLWICHP
LKDVEEINNRLNVVEELMAQSEVMVLLGTTYLRKLPDLERLLGQIKATVQSSASLVLPLI
RKKLQKRRVKLFGSLVKGLKTGLDLLIQVQKEGCIISLPKVVKLPQLSGNGGLNQFLTQF
EAAVDSEFPDYQNHDVTDSSAERLSILIEFFVERATEWSEVIHALNCIDVLRSFAVIAHT
SRGSMSRPLILPQSNNSTLSPEKQGPVLKIKGLWHPYALVESGETPVPNDIILGPDQDGY
HPRTLLLTGPNMGGKSTLLRSTCLAVVLAQLGCYVPCETCTFSVVDTIFTRLGATDRIMT
GESTFLVECSETASVLQHATQDSLVILDELGRGTSTFDGYAIAYAVFRQLIEKVNCRLLF
ATHYHPLTKEFASHPHVMLQHMACTFNDHELIFLYRLRSGACPESYGLQVATMAGIPGRV
VEAASRASQMMKQTIRENFKSSEQRSEFSTLHEEWLKTLITVSEFRGNDLDENDAFDTLF
CLWYELKRSYQC
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgccagaaatctttgctatccttcttccaaaaatctccgtccgataatcggagc
tctgatggcgctgcctcccccatcagtcagcggctcactcgctttccgccgaaaccaagc
gttgccggtttggagcagtcggctatccagaccactgcggatccttccctggagattaga
ggaaccgacactccgccggagaaggtgcctcgccagattttgccggcgattgagaagaac
agaggttcttcactcttttcaagcatcatgcacaaatttgtacgagccgatgataaacgt
aaggcgaatgagagggacgaggttcaaaaagatttctctcacaacgaggttcgaaaagat
tcttctcagttaccttccatttctggtaaggttaatgatccaaaagaattttcgaaacta
gatatagcttctaggcatcacggtaaactcaacgatgcaaatttaaacggacatagagga
tctgtcttggatattgaaagcgacgatgacattgctggaccagaaacacctggcatgcga
tcttctatctctcgtttgaagagatctcaagaggtttcttttgtggatggcagtggtgat
tctttgcaggatagtaccaaaagaattaaactccttcaggactctttgaacaagattcac
aatgaagtttctgacgcaactagcaaatttgagtggctcaatccctctcaagttagagac
gctaaccgtagaaggcctgaccatcctctgtatgataaaaaaacactatacataccacct
gacgtcctgaagaaaatgtcagcatcacaaaaacaatactggaatgtgaaatgtcaatat
atggacattttgcttttcttcaaagtggggaagttctatgagttatatgaacaagatgct
gaaattggtcacaaggagcttgattggaaaatgacattaagcggtgttgggaaatgtagg
caggttggtgttcctgagagtggaattgatgatgccattcaaaaacttgttgcttgcggt
tataaagttgggagagttgagcagttggaatcttcagatcaaacaaaaaccagaggtgca
aattctgtgatacccaggaaattggtgcaggttgtcactccatcaaccaaggccgacggt
gacattgggcctgatgctgtttgtttgcttgccatcaaagaggagagctgtgggctggag
aataattcaattgcatacgggtttgcatttgttgattgtgctgctttaaaattttggact
ggttctatcaaagatgatgcttcgttcgctgctttgggtgcgctcttgatgcaagtgtct
ccaaaggaaataatatatgaagctagaggactatctaaagaaacacaaaaagttctcaag
aagtactctccaactggctccactgctctagaattcacatcagggtctcaagtgacaaat
tttttagaaacttcagaggttaaacttttgatccagtctaaaggatattttaaaggctcc
ttgaatttgtggaatcatgcaaccgaaagcacagtccatgatgacattgctctatgtgca
cttggaggacttattaatcacatgtcaaggctgatgttagatgatgtcttgcggaatgga
gatttactgccataccaagtatacagaggctgcctaagaatggatggacaaacgatggtt
aatcttgaaattttcagaaacaatgatgatggtggtccatcaggtacactgtacaagtat
cttgataactgcgtgacatcatcaggaaagaggcttttgaggttatggatctgtcatcct
cttaaagatgttgaagagataaacaataggcttaatgtggttgaagaactgatggcacaa
tctgaagttatggtacttcttggcaccacctatcttcgcaagcttccggacttggagagg
ttgcttggacagattaaggctactgtccagtcatctgcttctcttgtattaccattgatt
cgaaaaaagttacagaaacggcgggttaaactattcgggtctctggtgaagggcctcaag
actggattggatctattaattcaagtccagaaggaaggttgcattatttctctaccaaaa
gtagttaaacttccacagctcagcggcaatggcgggcttaatcaattcctcactcaattt
gaagcagctgtagatagcgagtttccagattatcagaaccacgatgtaacggattccagt
gccgaaagactctctatactgattgagttttttgtagaaagagctactgaatggtctgaa
gtaatccatgccctcaattgtattgatgtgctgagatcatttgcagtcattgctcatacg
tctagagggtccatgtctaggcctcttattttgcctcaatcgaataattcaacgttgagt
ccagaaaagcaagggccagttcttaaaattaaagggctatggcatccatatgcccttgtg
gagagtggagaaacaccagtccctaatgatataatccttggtcccgatcaagatggctac
catccccgtactctgcttctaacaggaccaaacatgggcgggaaatcaacacttcttcgt
tccacttgcctagctgttgttcttgcacagttgggttgctatgtaccttgtgagacatgc
acgttctcagtcgttgataccatctttacgcgacttggtgccactgatcgaatcatgacg
ggagaaagcacattccttgttgaatgctcagaaacagcttcagttctccaacatgctact
caggactctcttgttattcttgatgaactcggccgaggaaccagcacttttgatggctat
gccattgcatatgctgtgtttcgccaattgatagaaaaggtgaactgtagacttctattt
gctactcactaccaccctctaacaaaggagtttgcctctcatcctcacgtcatgcttcaa
cacatggcctgcacattcaacgaccatgagctcatttttctatatcgccttcgctccgga
gcgtgccctgaaagctatggcttgcaagtagcaaccatggctggaatcccgggtcgagtt
gtggaagcagcttcaagagctagccaaatgatgaagcaaaccatcagagagaacttcaaa
tcgagtgagcaacgatcggagttttcgactcttcatgaagagtggttaaaaaccctaatc
acagtctcggagtttagaggtaatgatctcgacgaaaatgatgctttcgatacattattt
tgtttatggtatgagcttaagagatcatatcagtgctag
DBGET
integrated database retrieval system