Benincasa hispida (wax gourd): 120080920
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Entry
120080920 CDS
T07258
Name
(RefSeq) RNA helicase aquarius
KO
K12874
intron-binding protein aquarius
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120080920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bhj03041
]
120080920
Spliceosome [BR:
bhj03041
]
Complex B
Other components
Prp19-related factors
120080920
Complex C
120080920
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
AAA_11
AAA_12
Aquarius_N_3rd
AAA_19
AAA_30
UvrD-helicase
UvrD_C_2
AAA_22
ResIII
AAA
SLFN-g3_helicase
AAA_16
Motif
Other DBs
NCBI-GeneID:
120080920
NCBI-ProteinID:
XP_038891528
LinkDB
All DBs
Position
7
Genome browser
AA seq
1585 aa
AA seq
DB search
MPKVYGTGVYDFKRHRVAEYPVESNQVDDKPVESKPGAALPNTITLSEIQRDRLTKIAAA
NWSKVTDPSKPKKPFDPELVKKIYETELSVKEGRKTVPLQRVMILEVSQYLENYLWPNFD
PETATFEHVMSMILMVNEKFRENVAAWVCFYDRKDVFKGFLERVLRLKEGREISIAEKTN
YLVFMINAFQSLEDEIVSETVLRIAGLQSWHSLSYGRFQMELCLNTDIIKKWKRMIKREA
KEFIKRGEVFDPLSTLEVKFLRNLIEEFLEVLDGEVFPLSNSGDGNDQFVDVNGLIEGDN
ACILYCERFMEFLIDLLSQLPTRRYLRPLVADVGVVAKCHLSALYKHEKGKLFAQLVDLL
QFYEGFEINDHVGTQLTDDEVLQSHYDRVQSFQLLAFKKIPKLRELALANVGSIHKRADL
AKKLLVLSLPELKDLVCSKLKLVSKEDPWSDRVDFLIEVVVSFFEKQQSQKEAINALPLY
PNEEIMWDESVVPSINYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIREDIQE
AVPHLLAYINNEGQTAFRGWSRMAVPIKEFKITEVKQPNIGEVKPSSVTADVTFSISSYR
AQIRSEWNALKEHDVLFLLSISPSFEPLSSEEADKASVPQRLGLQCVRGCEIIEIRDEEG
TLMNDFTGRIKPDEWKPPKGELRTVTVALDTAQYHMDVSAIAEKGSEDVYGTFNVLMRRK
PKENNFKAILESIRDLMNEYCIVPDWLHNILLGYGNPSAAQWTNMPDLLEAVDFKDTFLD
ADHLKECFPDYEVCFTNPDGEEILHPSPPFRIRLPRVLKGSNHALPENKKSSSISKNDVN
MMDACAEKEKLMVEAYTPPDPGPYPQDQPKQNSVRFTPTQVGAIISGVQPGLTMVVGPPG
TGKTDTAVQVLNVLYHNCPSQRTLIITHSNQALNDLFEKIMERDVPARYLLRLGQGEQEL
ATDLDFSRQGRVNSMLVRRLELLSEVERLARSLQLPEDVGYTCETAGYFWLLHVYSRWEQ
FIAACAGNEDKSNFVQERFPFKEFFSNAPNPVFTGEFFDKDMRAAKGCFRHLKTMFQELE
ECRAFELLKSTADRANYLMTKQAKIVAMTCTHAALKRKDFLRLGFKYDNLLMEESAQILE
IETFIPMLLQRQEDGYARLKRCILIGDHHQLPPVVKNMAFQKYSHMDQSLFTRFVRLGIP
YIELNAQGRARPSIAKLYNWRYRELGDLPYVKEAVMFHRANAGFSYDYQLVDVPDYQGRG
ETAPSPWFYQNEGEAEYVVSVYIYMRLLGYPANKISILTTYNGQKLLIRDVINRRCVPYN
FIGAPSKVTTVDKFQGQQNDYILLSLVRTRFVGHLRDVRRLIVAMSRARLGLYVFCRRSL
FEQCYELQPTFQLLLQRPDRLGLNLNEITSYTERNVADTGPIYHVSGSEEMASILEQLYQ
IRISSQQFDGYTTHPGQLPPNDNVDIQQNAMDTEQANDDGVSDTTMETSKTDGLANGADG
GSAIENGLIENEDDEANKDSGPKEEPMLEDSSTKNDDDNEAKNDDDIEAKNDDDIEAKND
DNEADKDDENIVPQESNSDGTTMEE
NT seq
4758 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaggtgtatggaactggggtttacgatttcaagcgccacagagtggcggagtac
cccgtcgagtccaatcaggtcgacgacaagcccgtggagtccaagcctggtgcggcactg
ccaaacactataacgctttcggagattcagcgagaccggctgacgaagattgcggcggcg
aactggtcgaaagtaaccgacccttcgaagcctaagaagccctttgatccagagttagta
aagaagatttatgagacggagctttcggttaaagaggggcgcaagaccgtgcctctgcag
agggtgatgattttggaggtcagtcagtacttggaaaactatttgtggcctaattttgac
ccggagactgcgacgttcgagcatgtaatgtcgatgatactcatggttaatgagaagttt
cgagagaatgtagcagcttgggtatgtttttatgataggaaggacgtctttaaggggttt
cttgagagggttcttcgactgaaggagggaagagaaataagcattgcagagaaaacaaat
tatcttgtttttatgattaatgcctttcagagcttggaggatgagattgtcagtgagacg
gtattgagaatagcaggtctgcagtcttggcacagtttatcttatggtcgttttcagatg
gagctttgtcttaatactgatataattaagaaatggaaaagaatgataaagagagaggct
aaagagtttattaaacgaggggaggtttttgatccattgtcaactcttgaagtgaagttc
ttgagaaatctcattgaagagtttctggaggttttggatggtgaagtgttccctctgagt
aattcaggtgatggaaatgatcaatttgttgatgtcaatggcttgatagagggagacaat
gcttgcattttgtattgcgagaggttcatggagtttctgattgatcttttaagtcaactc
cctacaagaagataccttcgacctcttgttgctgatgttggtgttgttgccaaatgtcat
ttaagtgccctttacaaacatgaaaaaggcaaactttttgctcagctggttgatctgctg
cagttctacgaaggatttgagatcaatgatcatgttgggacacaattgacggatgatgag
gttctccaatctcattatgaccgtgtccaatcttttcagcttcttgcatttaagaagatt
ccaaagctgcgggaacttgcattggccaatgttggttcaattcataaacgtgctgacctt
gccaagaaactattggtgctttctcttccagagctgaaagatttggtttgctctaagctc
aagttagtgtcaaaagaagatccttggtcggatagagttgattttttgattgaggttgtt
gtttcctttttcgagaagcaacagtctcaaaaggaagccattaatgcacttccactatac
ccaaatgaggagataatgtgggatgagagcgttgtgccaagcataaattactcgggggaa
ggttgcttggctcttccaaagttaaatttacagtttttaacgctccatgactatcttctg
agaaatttcaatctcttccgcctggaatcaacttatgagatccgtgaagacattcaggaa
gctgtaccccatctccttgcctacattaataatgaggggcaaactgctttccgtggctgg
tcaagaatggccgtgccaattaaagaattcaagattactgaggtgaagcagccaaatatt
ggggaagtcaagccttcatctgtgacggcagatgtcacttttagcatttctagctataga
gcccaaataagatctgaatggaatgctcttaaggagcacgatgttttatttttactttct
attagtccatcatttgagcctctaagttcagaggaagctgacaaggccagtgttcctcaa
cgtcttggccttcagtgtgtacgaggatgtgaaattattgagattcgtgatgaagaggga
actctcatgaatgactttactggaagaattaaaccggatgagtggaaacctcctaagggg
gagttgagaactgtaactgtagctttggatacagcacagtaccatatggatgtcagtgct
attgcagagaagggttcagaagatgtctatgggacatttaatgtcttgatgaggaggaaa
cccaaggaaaataattttaaagctatattggaatctatcagggatcttatgaatgaatac
tgtatcgttcctgattggttgcacaatatacttcttggttatgggaatccttctgctgct
caatggactaacatgccagatcttttggaagcagtagacttcaaagatacatttcttgac
gctgatcatttgaaagaatgttttccagattatgaggtctgttttacaaatcccgatggt
gaggagattttgcacccaagtccccctttccggattaggcttcctagagttcttaaaggt
agcaatcatgccctcccggagaataagaagtcttcaagtatttcaaagaatgatgtaaac
atgatggatgcctgtgctgagaaggagaaacttatggttgaggcgtatactcctcctgac
ccaggtccttatcctcaagatcagcctaaacagaactctgtcagatttactccaacacag
gttggagcaattatctctggtgttcaacctggattaaccatggttgttggtccacctggt
actggaaagactgacacagccgttcaagttctaaatgttctttatcacaattgcccttca
cagagaacattgataatcactcactcaaatcaagctctgaatgacctattcgagaagata
atggagagagatgttcctgcccgctatctgcttcgccttggtcaaggtgaacaagaattg
gcaactgatcttgatttcagccgacaggggcgtgtcaattcgatgcttgtgcggaggttg
gaattgctaagtgaagtggagaggctggcaagatctctccaactccctgaagatgttgga
tatacttgtgaaactgccggatacttttggttactgcatgtgtactcacgctgggagcaa
tttatagctgcgtgtgctggaaatgaggataaatctaattttgttcaagagagatttccc
ttcaaggaatttttctccaatgcaccaaatccagttttcacgggtgaattttttgataaa
gatatgcgggcagctaaggggtgctttcgtcatctcaagacaatgtttcaggagcttgaa
gagtgtagagcttttgaattactcaagtctacagctgatcgtgcaaactacttgatgact
aagcaggcaaaaattgttgcaatgacttgcactcatgctgccctaaagaggaaagatttt
cttcgtttaggtttcaagtatgataatttgctaatggaagaaagtgcacaaatattagaa
attgaaacttttataccaatgttacttcagaggcaggaagatggttatgcacgtctcaaa
cgctgcattttgattggtgatcaccatcagttgccccctgttgttaagaatatggctttt
caaaagtatagccatatggaccaaagtttatttacaaggtttgtcagattgggcattcct
tatattgaactcaatgctcaaggtcgtgccagaccaagtatagccaagctttacaactgg
agatatagagaattgggagatcttccctatgtgaaggaggcagtcatgtttcatagagca
aatgctggattctcttatgattatcagctagtggatgtgccggactaccaagggaggggt
gagactgccccttctccttggttttatcagaacgagggggaagctgaatatgttgttagt
gtgtatatttatatgcgtttactagggtaccctgcaaataagatatctatcttgacaact
tacaatggccagaagcttctaatccgagatgttatcaatcgtagatgtgtaccatacaat
ttcattggtgcccctagcaaggttacgacagttgataaatttcaaggtcagcagaatgat
tatatattactgtctctagttcgaacccgctttgtggggcaccttcgtgatgttagaaga
ttgattgtggccatgtctcgtgctcgacttggtttgtatgtcttctgccgccgatctctg
tttgaacaatgttatgaactgcagccaacatttcagcttctgcttcaaaggcctgaccgc
cttggactcaacttgaatgagataacatcttatacagaacgtaatgtagcagacactggt
cctatttaccatgtgagtggtagtgaggagatggccagcattctggaacagctttatcag
attcggatcagcagccagcaatttgatgggtataccacacatccggggcagcttcctccc
aacgacaatgttgacatacagcaaaatgctatggatacagagcaggccaatgatgatggt
gtttcagacacaaccatggaaacttcaaagaccgatggtcttgcaaatggcgcagatgga
ggttctgcaattgaaaatggtttaattgagaatgaagatgatgaggctaacaaagacagt
ggaccgaaggaggagccaatgctcgaggatagttcgacgaagaatgatgatgataatgag
gctaagaatgatgatgatattgaggctaagaatgatgatgatattgaggctaagaatgat
gataatgaggctgataaagatgatgaaaatattgtgccacaggaaagtaattctgatgga
actacaatggaagaataa
DBGET
integrated database retrieval system
