Benincasa hispida (wax gourd): 120081325
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Entry
120081325 CDS
T07258
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120081325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhj03019
]
120081325
03110 Chaperones and folding catalysts [BR:
bhj03110
]
120081325
03029 Mitochondrial biogenesis [BR:
bhj03029
]
120081325
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bhj04147
]
120081325
Enzymes [BR:
bhj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
120081325
Messenger RNA biogenesis [BR:
bhj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
120081325
Chaperones and folding catalysts [BR:
bhj03110
]
Heat shock proteins
HSP60 / Chaperonin
120081325
Mitochondrial biogenesis [BR:
bhj03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
120081325
Exosome [BR:
bhj04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120081325
Exosomal proteins of other body fluids (saliva and urine)
120081325
Exosomal proteins of breast cancer cells
120081325
Exosomal proteins of colorectal cancer cells
120081325
Exosomal proteins of bladder cancer cells
120081325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DndB
Motif
Other DBs
NCBI-GeneID:
120081325
NCBI-ProteinID:
XP_038892006
LinkDB
All DBs
Position
7:42295419..42301315
Genome browser
AA seq
606 aa
AA seq
DB search
MASSPTPIPPLSFPNPTSRSRTKPRPIPNRPPSSLPPALNPTPKSPPKELYFNRDGSTFK
KLQVGVNLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENVGVKLV
RQAGAKTNDLAGDGSTTSVILAQGLIAEGMKVISSGMNPVQIARGIEKTAKALVSELKLL
SREVEDHEIAHVAAVSAGNDYAVGNLVSHALRQVGRKGVVQIEKGKSIDNSLQIVEGMQF
DRGYLSPYFVTDRKKMVVEFHDCKLLLVDKKISDPKEMFKILDSAVKEKYPIVILAEGIE
QEALAPVIRNKLRGVLKAAAIKAPAFGERKSHYLDDIATLTGAIVVREDSGLTLEKTGKE
VLGSASKVVISKDSTLIVTDGNTREAVRKRVLQIQKLMENTEEKFPKKILNERIARLSGR
IAILQVGAQTEVELKDRQLRIEDALNASKAAIEEGVVVGGGCCLLRLSTKVDAIKNVLEN
DEQMIGAEIFKRALSYPTKLIARNAGVNGSVVIDKVLINNDLDYGYNAATDRYEDLMKAG
IMDPSKVVRCCLEHAASVAKTFLTSDAVVVDMKEPEPISKRTPMPISGKWVNKYMSLYSL
ISICFD
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttctcccactccaatccctccactatcttttcccaatcccacatcaagatca
agaacaaagccaagaccaataccaaacagaccaccgtcttcgttgcctcctgcgttgaac
cccacccccaaatctccgcccaaggaactttacttcaaccgcgatggctctacctttaaa
aaacttcaggtcggagttaatttggtggcggagctggtgggtgttacgttagggccgaag
ggaaggaatgtggtgcttcagaacaaatatggaccgcccaagatcgttaacgatggcgaa
actgtcctgaaggagattgagctggaagaccctttagagaacgttggggtgaaattggtg
agacaagctggagcaaagacaaatgaccttgctggtgatggttccactacatctgtcatt
cttgctcagggattgattgctgagggtatgaaggttatttcttctggcatgaatcctgtt
caaattgcacgtgggattgagaagactgcaaaagcactagtttctgagctgaaattgctg
tcaagagaggttgaagatcatgagatagcacatgtggcggcagttagtgcagggaatgat
tatgctgtgggaaatttggtttcacatgcattacgtcaagttggtcggaagggagtcgtt
caaattgaaaaggggaagagtatcgataacagcctgcaaattgttgaagggatgcaattt
gatcgtggatatttatctccatactttgttactgatagaaagaagatggtagtagaattc
catgattgcaagttactattggtcgacaaaaaaatctcagatccaaaggagatgtttaaa
atattggacagtgctgtgaaagagaaatacccaattgtgatattggcagagggcattgag
caggaagctctggctccagtaattaggaataaacttagaggtgtgctgaaggcagctgct
atcaaggctcctgcctttggcgagcgcaagagtcactacttagatgacatagccacctta
actggagctattgtggtcagagaagatagtggattgactttagaaaagaccggcaaagag
gtattgggctctgctagtaaggttgttatatcaaaagattccactctaatagttacagat
gggaatactcgggaagctgttcgaaaaagggtcttacaaattcaaaagcttatggagaat
actgaggaaaaatttccgaagaagatattgaatgagagaattgcaaggttatctgggcga
attgcaatacttcaggtaggagcacaaactgaggttgagttgaaggatagacagttaagg
attgaggatgctttgaatgcatcaaaggctgctattgaagaaggtgttgtcgttggtgga
ggttgttgtcttttaaggctgtctacgaaggtggatgctataaagaatgtcctggaaaat
gacgaacagatgattggagccgaaattttcaaaagagctttgagctatcctacaaaacta
atagcgagaaatgccggtgtcaatggaagtgttgttatagataaggttcttattaacaat
gatttggattatggatataatgccgccacagatcgttacgaggatctaatgaaagctgga
atcatggatccatcaaaggtcgtgagatgttgcctggagcatgccgcttctgttgccaaa
acttttctgacatctgatgctgttgtagttgatatgaaggaaccagagcccatatcaaaa
agaacaccgatgccaatctcaggcaaatgggttaacaaatatatgagcctttattctctg
atatcaatttgttttgattaa
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